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Protein Overview: PHR1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen UBC7 PHR1 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PHR1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..71] deduced N/A No confident structure predictions are available.
2 View Details [72..224]
[260..284]
PSI-BLAST 809.0103 C-terminal domain of DNA photolyase; DNA photolyase
3 View Details [225..259]
[285..400]
PSI-BLAST 809.0103 C-terminal domain of DNA photolyase; DNA photolyase
4 View Details [401..565] PSI-BLAST 809.0103 C-terminal domain of DNA photolyase; DNA photolyase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • blue light photoreceptor activity
  • 9.1431674572348 bayes_pls_golite062009
  • photoreceptor activity
  • 6.86138041842095 bayes_pls_golite062009
  • DNA photolyase activity
  • 5.59238172310626 bayes_pls_golite062009
  • transcription repressor activity
  • 4.08500855631983 bayes_pls_golite062009
  • transcription regulator activity
  • 3.49617875539388 bayes_pls_golite062009
  • nucleic acid binding
  • 2.19167058827256 bayes_pls_golite062009
  • binding
  • 2.13238451443633 bayes_pls_golite062009
  • DNA binding
  • 2.05514577638135 bayes_pls_golite062009
  • deoxyribodipyrimidine photo-lyase activity
  • 2.01343813518186 bayes_pls_golite062009
  • FAD binding
  • 1.81559602758107 bayes_pls_golite062009
  • G-protein coupled photoreceptor activity
  • 0.698591133261382 bayes_pls_golite062009
  • catalytic activity
  • 0.609980967042895 bayes_pls_golite062009
  • damaged DNA binding
  • 0.5555984473366 bayes_pls_golite062009
  • protein binding
  • 0.452275661161724 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle