Protein Overview: YOR342C

General Information:
Name(s) found:	YOR342C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|74676546\|sp\|Q12182.1\|YO342_YEAST RecName: Full=Uncharacterized protein YOR342C [NCBI NR] gi\|6324918\|ref\|NP_014987.1\| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; Yor342cp [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S67251 hypothetical protein YOR342c - yeast (Saccharomyces cerevisiae) [NCBI NR] gi\|1420743\|emb\|CAA99666.1\| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR] gi\|1199845\|emb\|CAA65030.1\| O6283 [Saccharomyces cerevisiae] [NCBI NR] Uncharacterized protein YOR342C OS=Saccharomyces cerevisiae GN=YOR342C PE=1 SV=1 [Swiss-Prot] Protein of unknown function localised to cytoplasm and nucleus [mips] Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus [SGD] >Q12182 (Q12182) Chromosome XV reading frame ORF YOR342C [4932.FASTACCERV.txt] Chr XV from 967618-966659, reverse complement [hmr_yeast5_DM3-1_pombe.fasta] Chr XV from 966658-967617, reverse complement [yeastorf3.fasta] Chr XV from 966659-967618, reverse complement [yeastorf4.fasta] YOR342C, Chr XV from 966658-967617, reverse complement [yeast_orfs2] YOR342C SGDID:S0005869, Chr XV from 967620-966661, reverse complement, Uncharacterized ORF [yeastflysequest.fasta] Yor342cp [Saccharomyces cerevisiae]gi\|1420743\|emb\|CAA99666.1\| unnamed protein product [Saccharomyces cerevisiae]gi\|1199845\|emb\|CAA65030.1\| O6283 [Saccharomyces cerevisiae]gi\|2132133\|pir\|\|S67251 hypothetical protein YOR342c - yeast (Saccharomyces cerevi [nrdb_11152004_Chlamydomonas] (Q12182) S.cerevisiae chromosome XV reading frame ORF YOR342c (O6283) [cerv4932.FASTAC] YOR342C SGDID:S000005869, Chr XV from 967620-966661, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YOR342C SGDID:S000005869, Chr XV from 967622-966663, reverse complement, Uncharacterized ORF, "Hypothetical protein" [yeast-contam.fasta] YOR342C SGDID:S000005869, Chr XV from 967622-966663, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta] O6283 [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Uncharacterized protein YOR342C [nr-271106-contam.fasta] unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta] hypothetical protein; Yor342cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] [chemostatdb.fasta] Uncharacterized protein YOR342C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR342C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YOR342C SGDID:S000005869, Chr XV from 967625-966666, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus" [yeast-030211-contam.fasta] YOR342C SGDID:S000005869, Chr XV from 967625-966666, Genome Release 64-2-1, reverse complement, Verified ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOR342C has a paralog, YAL037W, that arose from the whole genome duplication" [20141208_orf_trans.fasta]
Organism:	Saccharomyces cerevisiae
Length:	319 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILEELNDS SIPQRLDNHI FFGSVHSLTH TDFLVENNIR FFINVDLSTE LISHIYHEVR  60
   61 SKFAHEIVIV NIDNDSQIPI ESDLVRSFHW HNTSLLQQLI HHLDFLSGIN NHGEPLTPPP 120
  121 ESHYRNAYVQ FDHPSDSVSI LDKLLYGNKS EYSRTNIFQV TNEAKFQVFN DLITIFKYSI 180
  181 AQGGNTNSNI LVLSENGSTD ENLISLLMST VLKENPTFNV YQALQFVKSI AVIPDTVRDE 240
  241 KILWVTGFIN YQELIKKNEM YWGLGSQKGR KLTSFASPIS KVERKQRRRD DQNIMRSKLP 300
  301 QQRQNPFCST ERPKRARCD

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		BFA1 CDC48 DOA1 FBP1 MRM1 NDT80 NPL4 OTU1 RDS2 SHP1 TEM1 TUP1 UBX4 UBX5 UBX7 UFD1 UFD2 YDR049W YGL108C YJR098C YNL155W YOR342C

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	BEM1	YOR342C	1	Unpublished Fields Lab Data
View Screen	PPG1	YOR342C	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YOR342C	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..319]	deduced	N/A	No confident structure predictions are available.
2	View Details	[154..319]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2