YRC Public Data Repository - Protein Structure Prediction

Protein:	YOR342C
Organism:	Saccharomyces cerevisiae
Length:	319 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR342C.

Description	E-value	Query Range	Subject Range
gi\|190407637 - gi\|190407637\|gb\|EDV10904.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|207340852 - gi\|207340852\|gb\|EDZ69075.1\| YOR342Cp-like protein [Saccharomyces cerevisiae AWRI1631] YOR342C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... gi\|151945419 - gi\|151945419\|gb\|EDN63662.1\| conserved protein [Saccharomyces cerevisiae YJM789] YO342_YEAST - Uncharacterized protein YOR342C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR342C ...	0.0	[1..319]	[1..319]

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Predicted Domain #1

Region A:
Residues: [1-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILEELNDS SIPQRLDNHI FFGSVHSLTH TDFLVENNIR FFINVDLSTE LISHIYHEVR  60
   61 SKFAHEIVIV NIDNDSQIPI ESDLVRSFHW HNTSLLQQLI HHLDFLSGIN NHGEPLTPPP 120
  121 ESHYRNAYVQ FDHPSDSVSI LDKLLYGNKS EYSRTNIFQV TNEAKFQVFN DLITIFKYSI 180
  181 AQGGNTNSNI LVLSENGSTD ENLISLLMST VLKENPTFNV YQALQFVKSI AVIPDTVRDE 240
  241 KILWVTGFIN YQELIKKNEM YWGLGSQKGR KLTSFASPIS KVERKQRRRD DQNIMRSKLP 300
  301 QQRQNPFCST ERPKRARCD

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [154-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTNIFQVTNE AKFQVFNDLI TIFKYSIAQG GNTNSNILVL SENGSTDENL ISLLMSTVLK  60
   61 ENPTFNVYQA LQFVKSIAVI PDTVRDEKIL WVTGFINYQE LIKKNEMYWG LGSQKGRKLT 120
  121 SFASPISKVE RKQRRRDDQN IMRSKLPQQR QNPFCSTERP KRARCD