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Protein Overview: YOR342C

General Information:
Name(s) found: YOR342C [SGD]
Description(s) found:
Found 27 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILEELNDS SIPQRLDNHI FFGSVHSLTH TDFLVENNIR FFINVDLSTE LISHIYHEVR  60
   61 SKFAHEIVIV NIDNDSQIPI ESDLVRSFHW HNTSLLQQLI HHLDFLSGIN NHGEPLTPPP 120
  121 ESHYRNAYVQ FDHPSDSVSI LDKLLYGNKS EYSRTNIFQV TNEAKFQVFN DLITIFKYSI 180
  181 AQGGNTNSNI LVLSENGSTD ENLISLLMST VLKENPTFNV YQALQFVKSI AVIPDTVRDE 240
  241 KILWVTGFIN YQELIKKNEM YWGLGSQKGR KLTSFASPIS KVERKQRRRD DQNIMRSKLP 300
  301 QQRQNPFCST ERPKRARCD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) BFA1 CDC48 DOA1 FBP1 MRM1 NDT80 NPL4 OTU1 RDS2 SHP1 TEM1 TUP1 UBX4 UBX5 UBX7 UFD1 UFD2 YDR049W YGL108C YJR098C YNL155W YOR342C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen BEM1 YOR342C 1 Unpublished Fields Lab Data
    View Screen PPG1 YOR342C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YOR342C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..319] deduced N/A No confident structure predictions are available.
    2 View Details [154..319] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle