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Protein Overview: PSD1

General Information:
Name(s) found: PSD1 / YNL169C [SGD]
Description(s) found:
Found 24 descriptions.
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  • Phosphatidylserine decarboxylase of the mitochondrial inner membrane, converts phosphatidylserine to phosphatidylethanolamine [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed article][TASLink to PubMed article]
    mitochondrial inner membrane [TASLink to PubMed article]
    Biological Process: phosphatidylcholine biosynthetic process [IDALink to PubMed article]
    Molecular Function: phosphatidylserine decarboxylase activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIMPVKNAL AQGRTLLMGR MPAVKFSTRM QLRNRTAVLW NRKFSTRLFV QQRRSSGEIV  60
   61 DRAKAAAANS GRKQVSMKWV VLTSFTIVLG TILLVSRNDS TEEDATEGKK GRRTRKIKIF 120
  121 NNNWLFFCYS TLPLNAMSRL WGQVNSLTLP IWVRPWGYRL YSFLFGVNLD EMEDPDLTHY 180
  181 ANLSEFFYRN IKPGTRPVAQ GEDVIASPSD GKILQVGIIN SETGEIEQVK GMTYSIKEFL 240
  241 GTHSHPLMSK SASSLDLTSD EEKHREFARV NRIQLAGSED TEQPLLNFKN EGDQSVREFK 300
  301 PSVSKNIHLL SQLSLNYFSN GFSCSEPHDT ELFFAVIYLA PGDYHHFHSP VDWVCKVRRH 360
  361 FPGDLFSVAP YFQRNFPNLF VLNERVALLG SWKYGFFSMT PVGATNVGSI KLNFDQEFVT 420
  421 NSKSDKHLEP HTCYQAVYEN ASKILGGMPL VKGEEMGGFE LGSTVVLCFE APTEFKFDVR 480
  481 VGDKVKMGQK LGIIGKNDLK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ADR1 AYR1 BGL2 CBP6 ENP1 FAA1 GAR1 GSP1 HEM15 HRP1 KAP104 KTR3 MRT4 NAB2 NDE1 OAC1 PET10 PET9 PSD1 RPT4 TFG2 VMA8 YDL063C YHM2 YNL035C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen CDC53 PSD1 1 Unpublished Fields Lab Data
    View Screen CHL4 PSD1 1 Unpublished Fields Lab Data
    View Screen NAF1 PSD1 1 Hazbun TR, et al. (2003)

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data PSD1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] MSA 1.013931 View MSA. No confident structure predictions are available.
    2 View Details [176..500] Pfam 128.167491 Phosphatidylserine decarboxylase No confident structure predictions are available.
    3 View Details [284..500] FFAS03 1.02 GLUCOSE PERMEASE IIA FROM MYCOPLASMA CAPRICOLUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.08152507119016 bayes_pls_golite062009
  • catalytic activity
    		•  0.303926649807816 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle