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Protein Overview: RMP1

General Information:
Name(s) found: RMP1 / YLR145W [SGD]
Description(s) found:
Found 26 descriptions.
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  • Subunit of RNase MRP, which processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ribonuclease MRP complex [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: rRNA processing [IMPLink to PubMed article]
    mRNA cleavage [IPILink to PubMed article]
    Molecular Function: ribonuclease MRP activity [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEMDNVIRS LEQEYRLILL LNHRNKNQHR AASWYGSFNE MKRNCGQIIT LFSSRRLQAK  60
   61 RLKDVEWVKL HRLLQRALFR QLKRWYWQFN GVIALGQFVT LGCTLVTLLA NVRALYMRLW 120
  121 EINETEFIRC GCLIKNLPRT KAKSVVNDVE ELGEIIDEDI GNNVQENELV ITSIPKPLTE 180
  181 NCKKKKKRKK KNKSAIDGIF G

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Hazbun TR, et al. (2003) POP1 POP3 POP4 POP5 POP6 POP8 RMP1 RPP1 SNM1
    View Details Krogan NJ, et al. (2006) POP1 POP3 POP4 POP5 POP6 POP7 RMP1 RPP1 RPR2 SNM1
    View Details Qiu et al. (2008) POP1 POP3 POP6 RMP1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RMP1 No Comments Hazbun TR, et al. (2003)
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data RMP1 and SPC42 Hazbun TR, et al. (2003)
    View Data RMP1 Hazbun TR, et al. (2003)
    View Data RMP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] MSA 3.010993 View MSA. Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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