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Protein Overview: YHR035W

General Information:
Name(s) found: YHR035W [SGD]
Description(s) found:
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  • gi|731648|sp|P38769.1|YHJ5_YEAST RecName: Full=Uncharacterized protein YHR035W [NCBI NR]
  • gi|6321824|ref|NP_011900.1| Putative protein of unknown function; not an essential gene; Yhr035wp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S46740 hypothetical protein YHR035w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|488174|gb|AAB68909.1| Yhr035wp [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YHR035W OS=Saccharomyces cerevisiae GN=YHR035W PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function [mips]
  • Putative protein of unknown function; not an essential gene [SGD]
  • YHR035W, Chr VIII from 178210-180102 [yeast_orfs2]
  • Chr VIII from 178210-180102 [yeastorf3.fasta]
  • (P38769) Hypothetical 72.3 kDa protein in SLT2-PUT2 intergenic region [4932.FASTACCERV.txt]
  • YHR035W SGDID:S0001077, Chr VIII from 178211-180103, Uncharacterized ORF [yeastflysequest.fasta]
  • Yhr035wp [Saccharomyces cerevisiae]gi|626605|pir||S46740 hypothetical protein YHR035w - yeast (Saccharomyces cerevisiae)gi|488174|gb|AAB68909.1| Yhr035wp [Saccharomyces cerevisiae]gi|731648|sp|P38769|YHJ5_YEAST Hypothetical 72.3 kDa protein in SLT2-PUT [nrdb_11152004_Chlamydomonas]
  • YHR035W SGDID:S000001077, Chr VIII from 178212-180104, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YHR035W SGDID:S000001077, Chr VIII from 178212-180104, Uncharacterized ORF, "Putative protein of unknown function; not an essential gene" [yeast-contam.fasta]
  • Hypothetical 72.3 kDa protein in SLT2-PUT2 intergenic region [nr-271106-contam.fasta]
  • Yhr035wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Putative protein of unknown function; not an essential gene; Yhr035wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YHR035W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR035W PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YHR035W SGDID:S000001077, Chr VIII from 178219-180111, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; not an essential gene" [yeast-030211-contam.fasta]
  • NEL1 SGDID:S000001077, Chr VIII from 178219-180111, Genome Release 64-2-1, Verified ORF, "Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSPTNFLYE PFSSDAVTQN YDQNLKCTKC GAYYSMACSL REQNVWTCLF CNQSNSNAEL  60
   61 PLVPSNTYTL TSAKKEILSR RTIMIIDAIC DPHELNYLVS ILCNNYITRQ QEPLSIITIQ 120
  121 QSGHVILHNA VNHRRDAVFS INEFMTKYNL DKLNASYFEK KISEINQESY WFDKSTQGSL 180
  181 RKLLREICKI ANKVNISSKR DKRCTGLALF VSSVLASQCS LSAYCHIVSF LNGPCTKGGG 240
  241 KVMSRERGES MRQNHHFESK SSQLQLSKSP TKFYKKMLEK FANQSLIYEF FIASLDQIGI 300
  301 LEMSPLITSS MAVSQFDSFN DERFAMSFQK YLNLRDHNAI YNCHSKIMTA KNAIVVKDFP 360
  361 KYSLNPKNLS LPLEISLGHN SAEAPIQFQT TFENQTEKYI RIETLLLPKA NRSFGAQNEI 420
  421 VFSMKKIASR IIDSFAYSSK HTKELMKQLF LLPNQIRGKD VDMVNLIQWC YHIYRSPILS 480
  481 VRNTSPDERY LFLHRIINAS KDTCLSLCKP FIWSYSDLKH DWIVLDVPLT RAQILQDDKT 540
  541 TICVDGGSYL VLRRGKLLEK EGRELCCKLL NDLQRFPQPL YVETKTGGSQ DRFLKSKIIP 600
  601 LDITDKETLG TEDMTFNEYF NLFTDLSGSK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ARA2 AYT1 BRO1 CDC73 CTR9 GLO4 HHT1, HHT2 LEO1 PAF1 PML39 POB3 PSH1 RTF1 SEN1 SPT16 YHR035W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SPT21 YHR035W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] MSA 1.041985 View MSA. No confident structure predictions are available.
    2 View Details [57..139] deduced N/A No confident structure predictions are available.
    3 View Details [140..481] MSA 1.049938 View MSA. No confident structure predictions are available.
    4 View Details [482..630] PSI-BLAST 2.69897 Severin, domain 2


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

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