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Protein Overview: SNT2

General Information:
Name(s) found: SNT2 / YGL131C [SGD]
Description(s) found:
Found 27 descriptions.
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  • DNA binding protein with similarity to the S. pombe Snt2 protein; computational analysis suggests a role in regulation of expression of genes encoding amine transporters [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1403 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: DNA binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKEEDFQLP RRREAAKNVN YNEMEIDTKL VQQIQIAEKS GAKTKGSNSQ TPRNCKRTSN  60
   61 PASRNEKFKY QKFLHDKNTC WNFIPTLPPS FRKNSRFSNI LDLDDAMIDL KKMSLFNTES 120
  121 VLLSANDTIY MISEPAGEPY YVGRVVNFVS KPEFSNTIHE AIKTTSVFPA KFFQVRMNWF 180
  181 YRPRDIQEHV NTFNPRLVYA SLHQDICPIS SYRGKCSIFH KDEVFDVLPN EKECIIRPNI 240
  241 FYFDELFDRY TLKYYKVYST DKILNKWNSK SPFLYVLNRR FRYIYTEPKY PLENVLKKYV 300
  301 FHELEVNELS PADYQWDKRC QFCKEWCIQK ESLSCDECGV CAHLYCMDPP LDRKPNKDVV 360
  361 WTCFSCLQKQ QGTKDSHVRF LEEQALELDF IRSVRQKIEE ISSKAIKENV GYNTENCWFQ 420
  421 YLGIYSISHI GDALNDSMFF PYPFKPSRVG VKYQWNGCNH NVPWRRNSYI SANSEEERGS 480
  481 TKTSELAWVL DASKITTRKL SEYIEQCKSE ICPILNVRGE TCNFIDVVLK NLLFTNYDTA 540
  541 EAFKKCKREL SRKFLKEPSF TAVEIRKFEE AVEKFGSELR PVCEYVGTQP MSMIVRFYYN 600
  601 WKKTERGLTV RGKLSKLSKN KRKKEIANHE NDVETKYIDD SSFDTEKLSL AESSFQCMFC 660
  661 KTDYSPMWYR VTGGSDDEKI KIRMQTGVNE KTEISEKSPA HSKKNEKLGA LCIRCARMWR 720
  721 RYAIKWVPPL ETLRKITGTC QNSFYSAIEG IIEENNTNKF TLSPFQAHNK LLEWELVQDS 780
  781 ELIIRQRMKV YKNPNSFVKM KRYSMTFHTQ LYKMAVRSYR KNEFHPETMQ RDLELFIEDN 840
  841 KEVRKAIPEQ KPERAKNTKD EFPVNIIRQS PGTIKTSDTS RNRKCNDVFI EKASNNNIPK 900
  901 ITNASNDLIE ISIKTGGSSS GSVSVDKGFK FVKFDNKTFQ RLRNSLKLVN NKLPKYNEPS 960
  961 TKKIKMINDI ALSNPLNEPN GASYNYTVIS HSKETSVALE KYHDGNKPSK MLEKDMILKH1020
 1021 TKNKPKNPDT AWANNSARTF CSVCKEKFND NDNYEVVCGN CGLTVHYFCY AIKLPKDMKK1080
 1081 NTNLKTFKWL CDPCSNDLNP IISTTYQCSM CPTKDYDYDR YRSQSFKICP DALKCTSLGT1140
 1141 WVHLVCSLFN EDIKYGNGQS MQPALNTTAV LIKHSRFTCG VCRINGGGLV KCNKCQYRYH1200
 1201 ITCAQNSSNF KLMFEKKNMS VDTTLPCIKD VKLNDTYTLR PILICDRHDI SLEGNELYPL1260
 1261 SYKPQHTLSY IEQYCRYYKC ESDHSLVELR YFEQLRLRHG EMPGNSHDSA IKPKIYVLPF1320
 1321 ERTCPHCGTN KSLYWYEDII CHSCNLRSGA QELDFDSASA NISNDNGLPV EITQQLMEGI1380
 1381 EPAMFDIDIS EAGTDKNTHP SSQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) SNT2 XBP1
    View Details Gavin AC, et al. (2002) ADH1 ENO2 FAR11 FAR3 FBA1 GPM1 HFM1 HSC82 PDC1 ROM2 SNT2 SSE2 TPI1
    View Details Ho Y, et al. (2002) SNT2 YLR413W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run ASF1 3829 - low filter Green EM, et al (2005)
    View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data SNT2 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..272] Pfam 31.420216 BAH domain No confident structure predictions are available.
    3 View Details [273..412] PSI-BLAST 7.045757 Nuclear corepressor KAP-1 (TIF-1beta)
    4 View Details [413..480] MSA 1.040987 View MSA. No confident structure predictions are available.
    5 View Details [481..556] deduced N/A No confident structure predictions are available.
    6 View Details [557..628] Pfam 10.376751 Myb-like DNA-binding domain No confident structure predictions are available.
    7 View Details [629..756] deduced N/A No confident structure predictions are available.
    8 View Details [757..1036] MSA 5.218996 View MSA. No confident structure predictions are available.
    9 View Details [1037..1119] Pfam 11.853872 PHD-finger No confident structure predictions are available.
    10 View Details [1120..1309] MSA 6.247989 View MSA. No confident structure predictions are available.
    11 View Details [1310..1403] Pfam 3.60206 GATA zinc finger No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle