| Protein: | SNT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1403 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNT2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1388] | [1..1388] |
|
|
3.0E-59 | [766..1205] | [58..459] |
|
|
3.0E-55 | [817..1262] | [33..461] |
|
|
4.0E-55 | [817..1262] | [33..461] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MPKEEDFQLP RRREAAKNVN YNEMEIDTKL VQQIQIAEKS GAKTKGSNSQ TPRNCKRTSN 60
61 PASRNEKFKY QKFLHDKNTC WNFIPTLPPS FRKNSRFSNI LD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-272] |
1 11 21 31 41 51
| | | | | |
1 LDDAMIDLKK MSLFNTESVL LSANDTIYMI SEPAGEPYYV GRVVNFVSKP EFSNTIHEAI 60
61 KTTSVFPAKF FQVRMNWFYR PRDIQEHVNT FNPRLVYASL HQDICPISSY RGKCSIFHKD 120
121 EVFDVLPNEK ECIIRPNIFY FDELFDRYTL KYYKVYSTDK ILNKWNSKSP
|
| Detection Method: | |
| Confidence: | 31.420216 |
| Match: | PF01426 |
| Description: | BAH domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [273-412] |
1 11 21 31 41 51
| | | | | |
1 FLYVLNRRFR YIYTEPKYPL ENVLKKYVFH ELEVNELSPA DYQWDKRCQF CKEWCIQKES 60
61 LSCDECGVCA HLYCMDPPLD RKPNKDVVWT CFSCLQKQQG TKDSHVRFLE EQALELDFIR 120
121 SVRQKIEEIS SKAIKENVGY
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1fp0A_ |
| Description: | Nuclear corepressor KAP-1 (TIF-1beta) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-480] |
1 11 21 31 41 51
| | | | | |
1 NTENCWFQYL GIYSISHIGD ALNDSMFFPY PFKPSRVGVK YQWNGCNHNV PWRRNSYISA 60
61 NSEEERGS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [481-556] |
1 11 21 31 41 51
| | | | | |
1 TKTSELAWVL DASKITTRKL SEYIEQCKSE ICPILNVRGE TCNFIDVVLK NLLFTNYDTA 60
61 EAFKKCKREL SRKFLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [557-628] |
1 11 21 31 41 51
| | | | | |
1 EPSFTAVEIR KFEEAVEKFG SELRPVCEYV GTQPMSMIVR FYYNWKKTER GLTVRGKLSK 60
61 LSKNKRKKEI AN
|
| Detection Method: | |
| Confidence: | 10.376751 |
| Match: | PF00249 |
| Description: | Myb-like DNA-binding domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [629-756] |
1 11 21 31 41 51
| | | | | |
1 HENDVETKYI DDSSFDTEKL SLAESSFQCM FCKTDYSPMW YRVTGGSDDE KIKIRMQTGV 60
61 NEKTEISEKS PAHSKKNEKL GALCIRCARM WRRYAIKWVP PLETLRKITG TCQNSFYSAI 120
121 EGIIEENN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [757-1036] |
1 11 21 31 41 51
| | | | | |
1 TNKFTLSPFQ AHNKLLEWEL VQDSELIIRQ RMKVYKNPNS FVKMKRYSMT FHTQLYKMAV 60
61 RSYRKNEFHP ETMQRDLELF IEDNKEVRKA IPEQKPERAK NTKDEFPVNI IRQSPGTIKT 120
121 SDTSRNRKCN DVFIEKASNN NIPKITNASN DLIEISIKTG GSSSGSVSVD KGFKFVKFDN 180
181 KTFQRLRNSL KLVNNKLPKY NEPSTKKIKM INDIALSNPL NEPNGASYNY TVISHSKETS 240
241 VALEKYHDGN KPSKMLEKDM ILKHTKNKPK NPDTAWANNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1037-1119] |
1 11 21 31 41 51
| | | | | |
1 ARTFCSVCKE KFNDNDNYEV VCGNCGLTVH YFCYAIKLPK DMKKNTNLKT FKWLCDPCSN 60
61 DLNPIISTTY QCSMCPTKDY DYD
|
| Detection Method: | |
| Confidence: | 11.853872 |
| Match: | PF00628 |
| Description: | PHD-finger |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1120-1309] |
1 11 21 31 41 51
| | | | | |
1 RYRSQSFKIC PDALKCTSLG TWVHLVCSLF NEDIKYGNGQ SMQPALNTTA VLIKHSRFTC 60
61 GVCRINGGGL VKCNKCQYRY HITCAQNSSN FKLMFEKKNM SVDTTLPCIK DVKLNDTYTL 120
121 RPILICDRHD ISLEGNELYP LSYKPQHTLS YIEQYCRYYK CESDHSLVEL RYFEQLRLRH 180
181 GEMPGNSHDS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1310-1403] |
1 11 21 31 41 51
| | | | | |
1 AIKPKIYVLP FERTCPHCGT NKSLYWYEDI ICHSCNLRSG AQELDFDSAS ANISNDNGLP 60
61 VEITQQLMEG IEPAMFDIDI SEAGTDKNTH PSSQ
|
| Detection Method: | |
| Confidence: | 3.60206 |
| Match: | PF00320 |
| Description: | GATA zinc finger |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
