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Protein Overview: YDR333C

General Information:
Name(s) found: YDR333C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative protein of unknown function [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 723 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRALRRLQ DDNALLESLL SNSNANKMTS GKSTAGNIQK RENIFSMMNN VRDSDNSTDE  60
   61 GQMSEQDEEA AAAGERDTQS NGQPKRITLA SKSSRRKKNK KAKRKQKNHT AEAAKDKGSD 120
  121 DDDDDEEFDK IIQQFKKTDI LKYGKTKNDD TNEEGFFTAS EPEEASSQPW KSFLSLESDP 180
  181 GFTKFPISCL RHSCKFFQND FKKLDPHTEF KLLFDDISPE SLEDIDSMTS TPVSPQQLKQ 240
  241 IQRLKRLIRN WGGKDHRLAP NGPGMHPQHL KFTKIRDDWI PTQRGELSMK LLSSDDLLDW 300
  301 QLWERPLDWK DVIQNDVSQW QKFISFYKFE PLNSDLSKKS MMDFYLSVIV HPDHEALINL 360
  361 ISSKFPYHVP GLLQVALIFI RQGDRSNTNG LLQRALFVFD RALKANIIFD SLNCQLPYIY 420
  421 FFNRQFYLAI FRYIQSLAQR GVIGTASEWT KVLWSLSPLE DPLGCRYFLD HYFLLNNDYQ 480
  481 YIIELSNSPL MNCYKQWNTL GFSLAVVLSF LRINEMSSAR NALLKAFKHH PLQLSELFKE 540
  541 KLLGDHALTK DLSIDGHSAE NLELKAYMAR FPLLWNRNEE VTFLHDEMSS ILQDYHRGNV 600
  601 TIDSNDGQDH NNINNLQSPF FIAGIPINLL RFAILSEESS VMAAIPSFIW SDNEVYEFDV 660
  661 LPPMPTSKES IEVVENIKTF INEKDLAVLQ AERMQDEDLL NQIRQISLQQ YIHENEESNE 720
  721 NEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run PAN1 No Comments Toshima J, et al (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YDR333C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..298] MSA 1.008954 View MSA. No confident structure predictions are available.
    2 View Details [299..353] deduced N/A No confident structure predictions are available.
    3 View Details [354..477] ORFEUS 9.73 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    4 View Details [478..608] ORFEUS 9.73 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    5 View Details [609..723] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.00861212399414 bayes_pls_golite062009
  • protein binding
    		•  1.51322932625387 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.92511049170437 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.777329345097548 bayes_pls_golite062009
  • DNA binding
    		•  0.67447901722682 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle