Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR333C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..713] | [1..713] |
|
|
0.0 | [1..666] | [1..591] |
|
|
0.0 | [1..666] | [1..591] |
|
|
0.0 | [1..670] | [12..571] |
|
|
0.0 | [116..663] | [22..567] |
|
|
0.0 | [274..663] | [89..454] |
|
|
8.0E-98 | [57..490] | [122..511] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MSSRALRRLQ DDNALLESLL SNSNANKMTS GKSTAGNIQK RENIFSMMNN VRDSDNSTDE 60
61 GQMSEQDEEA AAAGERDTQS NGQPKRITLA SKSSRRKKNK KAKRKQKNHT AEAAKDKGSD 120
121 DDDDDEEFDK IIQQFKKTDI LKYGKTKNDD TNEEGFFTAS EPEEASSQPW KSFLSLESDP 180
181 GFTKFPISCL RHSCKFFQND FKKLDPHTEF KLLFDDISPE SLEDIDSMTS TPVSPQQLKQ 240
241 IQRLKRLIRN WGGKDHRLAP NGPGMHPQHL KFTKIRDDWI PTQRGELSMK LLSSDDLL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [299-353] |
1 11 21 31 41 51
| | | | | |
1 DWQLWERPLD WKDVIQNDVS QWQKFISFYK FEPLNSDLSK KSMMDFYLSV IVHPD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.00861212399414 | bayes_pls_golite062009 |
| protein binding | 1.51322932625387 | bayes_pls_golite062009 |
| transcription regulator activity | 0.92511049170437 | bayes_pls_golite062009 |
| nucleic acid binding | 0.777329345097548 | bayes_pls_golite062009 |
| DNA binding | 0.67447901722682 | bayes_pls_golite062009 |
|
Region A: Residues: [354-477] |
1 11 21 31 41 51
| | | | | |
1 HEALINLISS KFPYHVPGLL QVALIFIRQG DRSNTNGLLQ RALFVFDRAL KANIIFDSLN 60
61 CQLPYIYFFN RQFYLAIFRY IQSLAQRGVI GTASEWTKVL WSLSPLEDPL GCRYFLDHYF 120
121 LLNN
|
| Detection Method: | |
| Confidence: | 9.73 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [478-608] |
1 11 21 31 41 51
| | | | | |
1 DYQYIIELSN SPLMNCYKQW NTLGFSLAVV LSFLRINEMS SARNALLKAF KHHPLQLSEL 60
61 FKEKLLGDHA LTKDLSIDGH SAENLELKAY MARFPLLWNR NEEVTFLHDE MSSILQDYHR 120
121 GNVTIDSNDG Q
|
| Detection Method: | |
| Confidence: | 9.73 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [609-723] |
1 11 21 31 41 51
| | | | | |
1 DHNNINNLQS PFFIAGIPIN LLRFAILSEE SSVMAAIPSF IWSDNEVYEF DVLPPMPTSK 60
61 ESIEVVENIK TFINEKDLAV LQAERMQDED LLNQIRQISL QQYIHENEES NENEG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
