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Protein Overview: YBR028C

General Information:
Name(s) found: YBR028C [SGD]
Description(s) found:
Found 28 descriptions.
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  • Putative protein kinase, possible substrate of cAMP-dependent protein kinase (PKA) [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 525 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: protein kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSLDEELH RVSLDDKKND IKVDYSSAIY NDINHEQGSS ITYEESINHL SVHSNAIPLN  60
   61 GMSPAHRMRR RSSAYSKFPI LTPPNTRRFS ITGSDAMRTN TNRLSITPQD IISSNIGENE 120
  121 LSRNLHDFKP VRVLGQGAYG KVLLVKDVNT SKLYAMKQLR KAEILISQTA TDSKREDEDK 180
  181 NDGNNNDNDD GLSKRLERTF AERSILSEIE HPNIVKLFYS FHDNSKLYLL LQYIPGGELF 240
  241 YHLKEHGTLD ETTVSFYAAE ISCALRFLHT KGVVYRDLKP ENCLLNQRGH LVLTDFGLSK 300
  301 KSANDSAVDE EDPENVNALY SIIGTPEYCA PEILLGKAYS QNCDWYSLGC LLYDMLVGKP 360
  361 PYTGSNHKVI INKIQQNKQG PKIPFYLSEG MKDILNALLK KETAKRWNVD KYWAKTGANN 420
  421 KPTKSKKKKS GAARTSLFTE HFIFRKIDWK LLESGQLQKT TLGPIVPVIT DLELAENFDT 480
  481 EFTSMSYEET YTDSKPININ SVSKSPDMFK GFSYKASGSY LEKYF

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) NUF2 SPC24 SPC25 TID3 YBR028C YDL073W
    View Details Ho Y, et al. (2002) BCY1 CAR2 CYS4 GND1 GTO1 LAA1 LYS1 SAH1 SNO2 SSN8 THI22 THO2 TIF1, TIF2 TPK2 TPK3 VPS21 YBR028C YCK1 YCK2 YCK3 YGR111W YPT53

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YBR028C HSP26 2 Unpublished Fields Lab Data
    View Screen YBR028C NMD5 2 Unpublished Fields Lab Data
    View Screen YBR028C YKL097C 2 Unpublished Fields Lab Data
    View Screen YBR028C UTP11 2 Unpublished Fields Lab Data
    View Screen YBR028C HCR1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YBR028C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..119]
    [198..217]
    [233..478]    		 PSI-BLAST 618.9897 cAMP-dependent PK, catalytic subunit
    3 View Details [120..197]
    [218..232]
    [479..525]    		 PSI-BLAST 618.9897 cAMP-dependent PK, catalytic subunit


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle