| General Information: |
|
| Name(s) found: |
SWD1 /
YAR003W
[SGD]
|
| Description(s) found:
Found 28 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 426 amino acids |
Gene Ontology: |
|
| Cellular Component: |
Set1C/COMPASS complex
[IPI ]
|
| Biological Process: |
histone methylation
[IDA][IMP]
telomere maintenance [IMP ]
regulation of transcription, DNA-dependent [IMP ]
chromatin silencing at telomere [IMP ]
|
| Molecular Function: |
histone methyltransferase activity (H3-K4 specific)
[IDA][IMP]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MNILLQDPFA VLKEHPEKLT HTIENPLRTE CLQFSPCGDY LALGCANGAL VIYDMDTFRP 60
61 ICVPGNMLGA HVRPITSIAW SPDGRLLLTS SRDWSIKLWD LSKPSKPLKE IRFDSPIWGC 120
121 QWLDAKRRLC VATIFEESDA YVIDFSNDPV ASLLSKSDEK QLSSTPDHGY VLVCTVHTKH 180
181 PNIIIVGTSK GWLDFYKFHS LYQTECIHSL KITSSNIKHL IVSQNGERLA INCSDRTIRQ 240
241 YEISIDDENS AVELTLEHKY QDVINKLQWN CILFSNNTAE YLVASTHGSS AHELYIWETT 300
301 SGTLVRVLEG AEEELIDINW DFYSMSIVSN GFESGNVYVW SVVIPPKWSA LAPDFEEVEE 360
361 NVDYLEKEDE FDEVDEAEQQ QGLEQEEEIA IDLRTREQYD VRGNNLLVER FTIPTDYTRI 420
421 IKMQSS |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
BRE2 SDC1 SET1 SHG1 SPP1 SWD1 SWD2 SWD3 |
| View Details | Krogan NJ, et al. (2006) |
|
BRE2 ERF2 SDC1 SET1 SHG1 SPP1 SWD1 SWD3 YHI9 YLL023C |
| View Details | Gavin AC, et al. (2006) |
|
BRE2 SDC1 SET1 SPP1 SWD1 SWD3 |
| View Details | Gavin AC, et al. (2002) |
|
BRE2 DOA4 RSM7 SDC1 SET1 SPP1 SSZ1 SWD1 SWD3 |
| View Details | Ho Y, et al. (2002) |
|
RNR2 SWD1 UBI4 |
| View Details | Qiu et al. (2008) |
|
BRE2 SDC1 SET1 SPP1 SWD1 SWD2 SWD3 |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..343] |  |
97.228787 | Tup1, C-terminal domain |
| 2 | View Details | [344..426] | |
2.221849 | TolB, C-terminal domain; TolB, N-terminal domain |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)