| Protein: | SWD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 426 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..425] | [860..1239] |
|
|
0.0 | [4..424] | [967..1387] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MNILLQDPFA VLKEHPEKLT HTIENPLRTE CLQFSPCGDY LALGCANGAL VIYDMDTFRP 60
61 ICVPGNMLGA HVRPITSIAW SPDGRLLLTS SRDWSIKLWD LSKPSKPLKE IRFDSPIWGC 120
121 QWLDAKRRLC VATIFEESDA YVIDFSNDPV ASLLSKSDEK QLSSTPDHGY VLVCTVHTKH 180
181 PNIIIVGTSK GWLDFYKFHS LYQTECIHSL KITSSNIKHL IVSQNGERLA INCSDRTIRQ 240
241 YEISIDDENS AVELTLEHKY QDVINKLQWN CILFSNNTAE YLVASTHGSS AHELYIWETT 300
301 SGTLVRVLEG AEEELIDINW DFYSMSIVSN GFESGNVYVW SVV
|
| Detection Method: |  |
| Confidence: | 97.228787 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [344-426] |
1 11 21 31 41 51
| | | | | |
1 IPPKWSALAP DFEEVEENVD YLEKEDEFDE VDEAEQQQGL EQEEEIAIDL RTREQYDVRG 60
61 NNLLVERFTI PTDYTRIIKM QSS
|
| Detection Method: | |
| Confidence: | 2.221849 |
| Match: | 1crzA_ |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
