YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|25516643, gi|...

General Information:
Name(s) found: gi|25516643 [NCBI NR]
gi|16410235 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • pir||AG1180 Glutamine ABC transporter (binding and transport protein) homolog lmo0847 [imported] - Listeria monocytogenes (strain EGD-e) [NCBI NR]
  • gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes] [NCBI NR]
    • Organism: Listeria monocytogenes
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFSRFILM MAIACVAAFI FTGNGLNAKA AEEIYLIGTD TTFAPFEFEK DGEHVGIDMD  60
   61 ILKAIAKDQN FKYEIKAMGF NAAVQALEAN QVDGVIAGMS ITDERKQKFD FSDPYFDSGV 120
  121 VMGILKDNDE IKTYDDLKGK KVAVKTGTEG YAFAEKIKDK YDFDIVVFDD SAQMYDDVKT 180
  181 RNSVACFDDY PVLAYGVQTG NGLKIVTEKE KGNSYGFAVN KGKNQELLEK FNAGLVNIKA 240
  241 SGEYEKILKN YLGKNAIKEN TTEKGFMGII KSSWPALLSG LWLTIRLAVV SLIIAFIIGI 300
  301 TFGFMKVSNS KILRGIATVY VDIFRGTPLI VQAFFFYFGI PAALDFRMPV FLAGVIALSL 360
  361 NAGAYMVEIV RGGIQSVDKG QMEAARSLGL PHKKAMMKVV LPQAIRMMIP SFINQFVITL 420
  421 KDTSIMSAIG LVELTQSGKI IMARTFESTW TWLIIGIMYL IVITILTKIS DRLERRLRND 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] PSI-BLAST 28.0 Glutamine-binding protein
    2 View Details [189..261] FFAS03 3.85 N-methyl-D-aspartate receptor subunit 1
    3 View Details [262..480] PSI-BLAST 20.154902 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  3.92658561501282 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.71430307970333 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  3.68263102620434 bayes_pls_golite062009
  • polyamine transmembrane transporter activity
    		•  3.56664180812545 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  3.45855021324499 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  3.44437031517765 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.25041295044206 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  3.25040168593981 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.16446457499691 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.11737631998936 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.11705111590472 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.10446376809293 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.10446376809293 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.10218613709054 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.08939958030684 bayes_pls_golite062009
  • polyamine-transporting ATPase activity
    		•  2.84609722276735 bayes_pls_golite062009
  • amino acid binding
    		•  2.79295963421917 bayes_pls_golite062009
  • peptide transporter activity
    		•  2.75577307623285 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  2.58578176144479 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  2.58578176144479 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.51750037542166 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  2.47628874886983 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.46598025840834 bayes_pls_golite062009
  • hydrolase activity
    		•  2.41680852416007 bayes_pls_golite062009
  • polyamine binding
    		•  2.27573366139794 bayes_pls_golite062009
  • ATPase activity
    		•  2.22107983126774 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.16305304794278 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.08989799392446 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.06979125310099 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.06762097920234 bayes_pls_golite062009
  • oligopeptide transporter activity
    		•  1.91036692266394 bayes_pls_golite062009
  • amine binding
    		•  1.8788269931912 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  1.65232476690022 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  1.59812090922796 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.57698908250492 bayes_pls_golite062009
  • binding
    		•  1.54172013140566 bayes_pls_golite062009
  • neutral amino acid transmembrane transporter activity
    		•  0.937785300129223 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.88623763826001 bayes_pls_golite062009
  • catalytic activity
    		•  0.674312982669564 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.55229829618114 bayes_pls_golite062009
  • L-amino acid transmembrane transporter activity
    		•  0.29299124929094 bayes_pls_golite062009
  • putrescine transmembrane transporter activity
    		•  0.212254208912362 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  0.0940079640524907 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.067986302221225 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.89128503869358 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.78071702105421 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.78024819585319 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.76480875126102 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.65928254714629 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.61840729006809 bayes_pls_golite062009
  • hydrolase activity
    		•  3.16970696790068 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  3.13976951511862 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  3.02008043485765 bayes_pls_golite062009
  • ATPase activity
    		•  2.90304684848114 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.85886572725081 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.78799656158331 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.78085051148891 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.76854894183109 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.76635806953632 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.42886654788147 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.77292242910033 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.77066316989042 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.54974155411368 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  1.37549816189565 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  1.35745015743741 bayes_pls_golite062009
  • catalytic activity
    		•  1.19420323065978 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  0.75828155378636 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  0.75828155378636 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  0.702245581829122 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.69074662322395 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.18066368771781 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  0.149318428666465 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle