| Protein: | SPBC1685.08 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1685.08.
| Description | E-value | Query Range |
Subject Range |
|
|
151.0 | [0..7] | [370..107] |
|
|
143.0 | [0..1] | [403..692] |
|
|
139.0 | [0..3] | [405..571] |
|
|
136.0 | [0..9] | [370..109] |
|
|
136.0 | [0..9] | [370..109] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MPSNSTPANE EKEEESEKIQ KSPVDTPHTP NGSVSDNEEN ETSSTGEVTR CVCGIVESDD 60
61 EASDGGLYIQ CDQCSVWQHG NCVGFADESE VPEVYYCEIC HPEFHKV
|
| Detection Method: |  |
| Confidence: | 8.69897 |
| Match: | 1wemA |
| Description: | Solution structure of PHD domain in death inducer-obliterator 1(DIO-1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 7.50578521120904 | bayes_pls_golite062009 |
| histone deacetylase activity | 7.35162059871663 | bayes_pls_golite062009 |
| deacetylase activity | 6.55925777139018 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 5.24378850198774 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.39452339322141 | bayes_pls_golite062009 |
| methylated histone residue binding | 4.19057851212315 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 3.20023500652896 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 3.20023500652896 | bayes_pls_golite062009 |
| histone binding | 3.01402804224903 | bayes_pls_golite062009 |
| binding | 2.93415748500038 | bayes_pls_golite062009 |
| transcription regulator activity | 2.89424169822343 | bayes_pls_golite062009 |
| DNA binding | 2.67786232715949 | bayes_pls_golite062009 |
| nucleic acid binding | 2.6327300364647 | bayes_pls_golite062009 |
| nucleosome binding | 1.69494047037058 | bayes_pls_golite062009 |
| transcription factor activity | 1.62385700361588 | bayes_pls_golite062009 |
| protein binding | 1.42349040268084 | bayes_pls_golite062009 |
| 1.38236406424542 | bayes_pls_golite062009 | |
| N-acetyltransferase activity | 1.19037129579681 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.873079221910902 | bayes_pls_golite062009 |
| transcription activator activity | 0.739132967687069 | bayes_pls_golite062009 |
| transcription repressor activity | 0.507152521861549 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.476506467104495 | bayes_pls_golite062009 |
| protein kinase activity | 0.405766438875014 | bayes_pls_golite062009 |
| acetyltransferase activity | 0.39905022319963 | bayes_pls_golite062009 |
| chromatin binding | 0.39425178848458 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.327424740985033 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.199823005659601 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.14235705491362 | bayes_pls_golite062009 |
| kinase activity | 0.12732151557306 | bayes_pls_golite062009 |
| 0.0927457062201698 | bayes_pls_golite062009 | |
| sequence-specific DNA binding | 0.0725773086825168 | bayes_pls_golite062009 |
| transcription factor binding | 0.0538806851320555 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K4 specific) | 0.0490968711985191 | bayes_pls_golite062009 |
| histone acetyl-lysine binding | 0.0410393640547611 | bayes_pls_golite062009 |
|
Region A: Residues: [108-209] |
1 11 21 31 41 51
| | | | | |
1 YQRGRGAKQS KYLGNGKPIE ASQTEESSST PPSPATKKSS KQRLTMNSRD AALDYEEYLA 60
61 IAKEKSLIPR RSRGRTSSKS LSPPAPQDES QGTEINLKQK IE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-424] |
1 11 21 31 41 51
| | | | | |
1 EENDEILEDS KESKDENEEN KETSTTNVAE TDAPEEETVD TVEEIADEEK HSVKEESGEA 60
61 SPQSSQQSTI TSISTTTRST RKAKREAAAE DKADLPAAVA PKPSKTRKVG GRRGKSSSND 120
121 NHRIPQLHPD GTFVETITKP KGLHSRITMT EMRRRVASML EYIGHIQVEM AAQSAGNQSS 180
181 TKSSKEGPEE EKETLRMVDN LTRDLLHWEQ RFSRT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
