YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: sck2
Organism: Schizosaccharomyces pombe
Length: 646 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sck2.

Description E-value Query
Range
Subject
Range
gi|44982222 - gi|44982222|gb|AAS51531.1| ADL389Wp [Ashbya gossypii ATCC 10895]
gi|44982222, gi|... - gi|45187484|ref|NP_983707.1| ADL389Wp [Ashbya gossypii ATCC 10895], gi|44982222|gb|AAS51531.1| ADL38...
377.0 [0..1] [630..1]
gi|116181542, gi... - gi|88185696|gb|EAQ93164.1| hypothetical protein CHGG_01399 [Chaetomium globosum CBS 148.51], gi|1161...
377.0 [0..23] [608..3]
gi|85117676 - gi|85117676|ref|XP_965300.1| serine/threonine-protein kinase sck1 [Neurospora crassa OR74A]
gi|28927107, gi|... - gi|32420385|ref|XP_330636.1| hypothetical protein [Neurospora crassa], gi|28927107|gb|EAA36064.1| se...
374.0 [0..9] [614..203]
gi|49648694 - gi|49648694|emb|CAG81014.1| YALI0D14542p [Yarrowia lipolytica]
gi|49648694, gi|... - gi|50550707|ref|XP_502826.1| YALI0D14542p [Yarrowia lipolytica], gi|49648694|emb|CAG81014.1| YALI0D1...
373.0 [0..3] [626..40]
gi|9716257 - gi|9716257|emb|CAC01625.1| protein kinase C homologue [Tuber borchii]
372.0 [0..2] [598..559]
gi|119186987, gi... - gi|90302886|gb|EAS32517.1| hypothetical protein CIMG_03541 [Coccidioides immitis RS], gi|119186987|r...
370.0 [0..2] [606..36]
gi|227604 - gi|227604|prf||1707301A protein kinase
369.0 [0..195] [610..31]
KPC1_COCHE - Protein kinase C-like OS=Cochliobolus heterostrophus GN=PKC1 PE=3 SV=1
367.0 [0..6] [598..598]
gi|38109783, gi|... - gi|39950824|ref|XP_363325.1| hypothetical protein MG01251.4 [Magnaporthe grisea 70-15], gb|EAA55600....
365.0 [0..25] [608..247]

Back

Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNKWAKNWF GLSKKSVSTN SAKGSLPRSP LASIQTNQPV EEGEGGSLPS VSNLGPSSID  60
   61 HPMEEFASDQ STVGNRNSND ILPEVDHEPS GYLKLQIGSL VLGGPHTDAA LAMECSRLNQ 120
  121 LFVVVQFGTT EFVSPPLKWE SPGRDIGTSS RDSANVSRSS SMMSSHPIPT PA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.954
Match: 2hglA
Description: No description for 2hglA was found.

Predicted Domain #2
Region A:
Residues: [173-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQRTSSIPNP LTPSYVVFDV AKPVPIDVNI YDHGNNNEFV GRTYIHPSYN YGQFEQFCNS  60
   61 VEVSPAYNRM VDLRLSLNTV FQPLSQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [259-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSYGPDDFVP LKLIGKGTFG QVYLVRKKDT ERVYAMKVLS KKVIVRRKEV AHTVGERDIL  60
   61 VQTSAADSPF IVALRFSFQT PKDLYLVTDY MAGGELFWHL QKSVRFPEER AKFYIAELLL 120
  121 ALQALHKRGI VYRDLKPENI LLDVQGHIAL CDFGLSKANL SVGTTTRTFC GTTDYLAPEV 180
  181 ILDEAGYDMM VDFWSLGVLL YEMTCGWSPF YADNTQQLYK NIVFGKVRFP RGLLSVEARD 240
  241 LIKLLLNRNP KHRLGAHGDV EEVMKHPFFD GIDWKKLAAK EIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1h1wA
Description: 3-phosphoinositide dependent protein kinase-1 Pdk1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
cyclic nucleotide-dependent protein kinase activity 4.97855712164511 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
cAMP-dependent protein kinase activity 4.66277812893755 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
transmembrane receptor protein kinase activity 2.54265774272269 bayes_pls_golite062009
molecular transducer activity 2.40586892801446 bayes_pls_golite062009
signal transducer activity 2.40586892801446 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 2.16831387024372 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
actin binding 1.87817875565699 bayes_pls_golite062009
acetylcholine receptor activator activity 1.83545227594542 bayes_pls_golite062009
phosphoinositide 3-kinase binding 1.82515074380651 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
insulin receptor substrate binding 1.62657794525303 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.32254739984688 bayes_pls_golite062009
gamma-tubulin binding 1.28511591054866 bayes_pls_golite062009
kinase binding 1.26086833316556 bayes_pls_golite062009
ErbB-3 class receptor binding 1.25765701903393 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transporter activity 1.11833481501707 bayes_pls_golite062009
protein kinase binding 1.06030596516506 bayes_pls_golite062009
ErbB-2 class receptor binding 1.02996109010965 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.959360414036299 bayes_pls_golite062009
growth factor binding 0.86076618871384 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
actin filament binding 0.794152600084 bayes_pls_golite062009
nucleic acid binding 0.794058505655489 bayes_pls_golite062009
transcription regulator activity 0.775404673285876 bayes_pls_golite062009
DNA binding 0.714163549867672 bayes_pls_golite062009
substrate-specific transporter activity 0.705905455086486 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
transcription factor activity 0.563262875317016 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.450699332958421 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
insulin receptor binding 0.266450215230107 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
insulin receptor activity 0.237134032032089 bayes_pls_golite062009
SH2 domain binding 0.226760162354251 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.20643152368029 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.20643152368029 bayes_pls_golite062009
receptor binding 0.197402253061255 bayes_pls_golite062009
ion transmembrane transporter activity 0.148194101970458 bayes_pls_golite062009
peptide binding 0.118578378753757 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [542-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPFKPIVEGE IDVSNFDVEF TNKAIDRDFS STDEMSTSAP LSSTVQNGFK GFTYIDASAM  60
   61 DEAFGYHNSN DSASSISSQD DYSKDNSDMD LNRANDEVFM GQIDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.045757
Match: 2jdoA
Description: No description for 2jdoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle