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View Structure Prediction Details

Protein: CalpC-PA
Organism: Drosophila melanogaster
Length: 681 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CalpC-PA.

Description E-value Query
Range
Subject
Range
gi|49900979 - gi|49900979|gb|AAH75862.1| CAPN1 protein [Homo sapiens]
590.0 [0..1] [679..38]

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Predicted Domain #1
Region A:
Residues: [1-681]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKYERILS DCRSKNVLWE DPDFPAVQSS VFYYQTPPFT FQWKRIMDLA DSGSGAVAAN  60
   61 SSAAPVFLNE SAEFDVVPGK MGDRWLVSCL GLLSSLRNLF YRVVPADQTL ASAHGVFRFR 120
  121 LWWCGEWVEV LVDDRLPTIN GRLAFMQPQA SNCFWAALLE KAIAKLHGSY EALKYGTRSD 180
  181 GLTDLLGGVV RQMPILSDNI RPQTLKELLT TTCIVTCLAD KSATVAKKNL AERMPNGILV 240
  241 NVNYRLSSLD KVKTLMGDSV QLVCLKDTFS SKPFGEKTHF LGDWSPMSKT WERVSQVERA 300
  301 RLIRQLGPGE FWLSFCDFVE IFSTMEVVYL DTETSNDEEM LKSRPLHWKM KMHQGQWKRG 360
  361 VTAGGCRNHE SFHINPQLLI SVQDEQDLVI ALNQHTAVEP KVIGFTMYTW DGEYMLSECL 420
  421 QKDFFKNHVS YLNSDYGNTR HVSYHTHLEA GHYVLIPTTY EPAEEAHFTV RILGTGSFRL 480
  481 SCLETQTMIL LDPFPALKST DAERCGGPKV KSVCQYEPVY MQLADENKTI NCFELHELLE 540
  541 ACLPNDYIKG CANIDICRQV IALQDRSGSG RITFQQFKTF MVNLKSWQGV FKMYTKEKAG 600
  601 ILRAERLRDA LCDIGFQLST DIMNCLIQRY IRKDGTLRLS DFVSAVIHLT TAFNQFHLKN 660
  661 YGQVNVIEVH LHDWIKSILS C

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1kfuL
Description: Calpain large subunit, C-terminal domain (domain IV); Calpain large subunit, middle domain (domain III); Calpain large subunit, catalytic domain (domain II)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of muscle 6.34041234021534 bayes_pls_golite062009
myosin heavy chain binding 4.20811099622311 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.95815414384 bayes_pls_golite062009
peptidase activity 3.19059336788201 bayes_pls_golite062009
cysteine-type peptidase activity 3.05412701733177 bayes_pls_golite062009
endopeptidase activity 2.91734319991078 bayes_pls_golite062009
hydrolase activity 2.43328552376748 bayes_pls_golite062009
troponin T binding 2.39237700612893 bayes_pls_golite062009
myosin II heavy chain binding 2.30950552746179 bayes_pls_golite062009
ion transmembrane transporter activity 2.29802198409541 bayes_pls_golite062009
cation transmembrane transporter activity 2.28098452079347 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.16689842778043 bayes_pls_golite062009
cysteine-type endopeptidase activity 1.95802900199539 bayes_pls_golite062009
protein binding 1.92445772322782 bayes_pls_golite062009
binding 1.92046698500094 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.74951443813569 bayes_pls_golite062009
transporter activity 1.21845572420504 bayes_pls_golite062009
actin binding 1.1967948958876 bayes_pls_golite062009
cytoskeletal protein binding 1.19670958990587 bayes_pls_golite062009
signal transducer activity 1.11706264292297 bayes_pls_golite062009
molecular transducer activity 1.11706264292297 bayes_pls_golite062009
small conjugating protein-specific protease activity 1.07520173658976 bayes_pls_golite062009
catalytic activity 1.05972260874031 bayes_pls_golite062009
transmembrane transporter activity 1.00091316610003 bayes_pls_golite062009
nitric-oxide synthase binding 0.965098383344279 bayes_pls_golite062009
nucleic acid binding 0.952536088972875 bayes_pls_golite062009
cation channel activity 0.856991182112951 bayes_pls_golite062009
calcium ion binding 0.687204894708051 bayes_pls_golite062009
motor activity 0.68020805045422 bayes_pls_golite062009
transcription regulator activity 0.654911807161532 bayes_pls_golite062009
DNA binding 0.561772300480686 bayes_pls_golite062009
microfilament motor activity 0.515693296786409 bayes_pls_golite062009
ubiquitin-specific protease activity 0.495368836247989 bayes_pls_golite062009
substrate-specific transporter activity 0.484449686814032 bayes_pls_golite062009
substrate-specific channel activity 0.366129174039334 bayes_pls_golite062009
0.34446792626966 bayes_pls_golite062009
voltage-gated cation channel activity 0.341357838238159 bayes_pls_golite062009
channel regulator activity 0.32809521759917 bayes_pls_golite062009
voltage-gated channel activity 0.308919475701377 bayes_pls_golite062009
voltage-gated ion channel activity 0.304496519713588 bayes_pls_golite062009
potassium channel activity 0.260530997378698 bayes_pls_golite062009
calcium-dependent cysteine-type endopeptidase activity 0.196538841514154 bayes_pls_golite062009
active transmembrane transporter activity 0.193338880082314 bayes_pls_golite062009
gated channel activity 0.175191914660841 bayes_pls_golite062009
calcium-dependent protein binding 0.170792976663713 bayes_pls_golite062009
voltage-gated potassium channel activity 0.157059988605635 bayes_pls_golite062009
tubulin binding 0.11107511867058 bayes_pls_golite062009
passive transmembrane transporter activity 0.0711800677928949 bayes_pls_golite062009
channel activity 0.0711800677928949 bayes_pls_golite062009
protein complex binding 0.0676093357928913 bayes_pls_golite062009
ion channel activity 0.0166394982861724 bayes_pls_golite062009
transcription factor activity 0.00805573746748856 bayes_pls_golite062009

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Created and Maintained by: Michael Riffle