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View Structure Prediction Details

Protein: Nek2-PA
Organism: Drosophila melanogaster
Length: 735 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nek2-PA.

Description E-value Query
Range
Subject
Range
gi|73964113 - gi|73964113|ref|XP_854718.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3 isof...
371.0 [0..4] [724..41]

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Predicted Domain #1
Region A:
Residues: [1-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGEESAGMD FSQKTLQDYE VLAVMGNGSF GTCYKVRDKS TGELFAWKGM NYDELDEAKC  60
   61 DALVSEISVL RQLQHPNIVQ YYHHLVNREA KSVYIVMECC AGGDLAQIVQ RARSQRQRFE 120
  121 EPYIWRVLFQ LCRALQVCHN KIPNGTILHR DIKPANIFLD AAGNAKLGDF GLARMLRRDQ 180
  181 SFAASFVGTP HYMSPELVKG RKYDRKSDVW AVGCLVYEMC ALRPPFRGRA FDQLSEKIAQ 240
  241 GEFSRIPAIY STDLQEIIAF MLAVDHEQRP GIEVIIRHPL VVRNISEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.154902
Match: 2javA
Description: No description for 2javA was found.

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
cyclin-dependent protein kinase activity 4.62392503670521 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
phosphoinositide 3-kinase binding 2.41610417530517 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
cation transmembrane transporter activity 1.93176092222748 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
ion transmembrane transporter activity 1.90354666768303 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
telethonin binding 1.75733591474207 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.71452519680794 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
insulin receptor substrate binding 1.62657794525303 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.6084489855403 bayes_pls_golite062009
transcription regulator activity 1.56748951434625 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
DNA binding 1.35333135345112 bayes_pls_golite062009
actin binding 1.33479685165255 bayes_pls_golite062009
gamma-tubulin binding 1.28511591054866 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.27184436658773 bayes_pls_golite062009
insulin receptor activity 1.22442673174261 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
nucleic acid binding 1.16049201286103 bayes_pls_golite062009
transcription factor activity 1.10928254946881 bayes_pls_golite062009
transcription activator activity 0.997272622653026 bayes_pls_golite062009
PTB domain binding 0.9900774724568 bayes_pls_golite062009
alpha-actinin binding 0.877087652539674 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.872782211382796 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
insulin binding 0.614254468447749 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
transporter activity 0.595111702412257 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
transmembrane transporter activity 0.41384976209545 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
protein complex binding 0.343240719858581 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
insulin receptor binding 0.266450215230107 bayes_pls_golite062009
cation channel activity 0.245400615103891 bayes_pls_golite062009
actin filament binding 0.2403700250846 bayes_pls_golite062009
SH2 domain binding 0.226760162354251 bayes_pls_golite062009
substrate-specific transporter activity 0.0922946791401962 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [289-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGKFPILVDS GEDFYTLPSG ARLFEDEEED GVHPELSSTM FTEQYSFNEG YGQRRLSVTG  60
   61 VFTPDLRSEL FYSAKRKIFP AKKLQLSDPS LYESIRREER AEERQVELAE ERRRKKDQEQ 120
  121 QKRDQELLKE APSSPRALTQ NIFDEVLKTR LHAIRAQESL LQQKLEELQT REQELQLAEQ 180
  181 RVQTLERQMQ EKLLQQEKHT CSCRQPIAPP IPPRKPAKSH H

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.49
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #3
Region A:
Residues: [510-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDTYCTIELN ETSPTVAKLN LATLPAPKSL NTLRKVTFKS PQKFVTYGIE NMPPPAVKPA  60
   61 VNPPPTGVPM QMSVSSNDSG DSQASSTRRK SILSLFGLSR GSKATSKSLP SVNQVAQAAA 120
  121 TRVQRPPLAV KPPITQEQPA EVPPVANLWT KEQKKQAFE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.36
Match: 1h1kI
Description: THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [669-735]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLAAMNAAER EASGGGVVGS GPGGARRQHL RQSVRERNST LQRNRMRRSL VVATGHQKLT  60
   61 TRDQMVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 1ul7A
Description: Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle