| Protein: | LAF2_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAF2_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..10] | [272..71] |
|
|
255.0 | [0..27] | [272..56] |
|
|
254.0 | [0..6] | [271..121] |
|
|
254.0 | [0..7] | [271..135] |
|
|
252.0 | [0..2] | [251..32] |
|
|
240.0 | [0..12] | [266..103] |
|
|
238.0 | [0..5] | [271..126] |
|
|
221.0 | [0..49] | [269..306] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MQILKDQENL NPDGGSFVLI TPPLSPPKQK SLSYTNISRR HGMRACMKGI VYEVYKNQPK 60
61 LWLQQELIWL RRKRIHPIPK ARRNNHVGRW ANRHSNVSSS SGSRGRSSVS SRDSSPSYSG 120
121 ALRSAERSIS SSPSTIEARR RKSARGNGLN GAIDVANLPF EELPNFCPDM SVLDNRTHPR 180
181 TLKAEWKGPP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [191-272] |
1 11 21 31 41 51
| | | | | |
1 LDLSDDPYRD LLHPAELHLA STLRLPCLIY LDNKKRIFAE WHHRRQQGLT FRKTDAQRAS 60
61 RVDVNKASRL WKAFHEVGFF DD
|
| Detection Method: | |
| Confidence: | 25.221849 |
| Match: | 2aqeA |
| Description: | Structural and functional analysis of ada2 alpha swirm domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| protein deacetylase activity | 3.96372663553041 | bayes_pls_golite062009 |
| histone deacetylase activity | 3.87144180477793 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.5139760613123 | bayes_pls_golite062009 |
| deacetylase activity | 3.25252407184239 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| transcription activator activity | 3.10621734076555 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.16849420369653 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.62096064323298 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.40149699217445 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.40149699217445 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.284650049512347 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.2679415219517 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.236060274498333 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.212884313176726 | bayes_pls_golite062009 |
