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View Structure Prediction Details

Protein: gi|94543962, gi|...
Organism: Streptococcus pyogenes MGAS10270
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|94543962, gi|....

Description E-value Query
Range
Subject
Range
gi|76797917, gi|... - gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding ...
gi|25011226, gi|... - gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding pro...
gi|77163480, gi|... - gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding ...
gi|77172691, gi|... - gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding ...
283.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLYSFLAG VLGVIVILTS LSFILQKKSG SGSQSDKLVI YNWGDYIDPA LLKKFTKETG  60
   61 IEVQYETFDS NEAMYTKIKQ GGTTYDIAVP SDYTIDKMIK ENLLNKLDKS KLVGMDNIGK 120
  121 EFLGKSFDPQ NDYSLPYFWG TVGIVYNDQL VDKAPMHWED LWRPEYKNSI MLIDGAREML 180
  181 GVGLTTFGYS VNSKNLEQLQ AAERKLQQLT PNVKAIVADE MKGYMIQGDA AIGITFSGEA 240
  241 SEMLDSNEHL HYIVPSEGSN LWFDNLVLPK TMKHEKEAYA FLNFINRPEN AAQNAAYIGY 300
  301 ATPNKKAKAL LPDEIKNDPA FYPTDDIIKK LEVYDNLGSR WLGIYNDLYL QFKMYRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.221849
Match: 1potA
Description: SPERMIDINE/PUTRESCINE-BINDING PROTEIN COMPLEXED WITH SPERMIDINE (MONOMER FORM)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
polyamine transmembrane transporter activity 6.4955392556526 bayes_pls_golite062009
polyamine-transporting ATPase activity 5.55983439723443 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 5.10369591387353 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 5.10318083615538 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 5.10318083615538 bayes_pls_golite062009
active transmembrane transporter activity 5.08926597039825 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 5.08835444171664 bayes_pls_golite062009
primary active transmembrane transporter activity 5.0778580713249 bayes_pls_golite062009
polyamine binding 4.52047643422812 bayes_pls_golite062009
ATPase activity, coupled 4.39934929410381 bayes_pls_golite062009
transporter activity 4.36277471796561 bayes_pls_golite062009
amine transmembrane transporter activity 4.06067446901213 bayes_pls_golite062009
transmembrane transporter activity 4.05122336499684 bayes_pls_golite062009
ATPase activity 4.04125376161476 bayes_pls_golite062009
substrate-specific transporter activity 3.47889550245964 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 3.25040168593981 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 3.16446457499691 bayes_pls_golite062009
organic acid transmembrane transporter activity 3.1010430082527 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 3.08561402450657 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.87472545473244 bayes_pls_golite062009
putrescine transmembrane transporter activity 2.81060956700345 bayes_pls_golite062009
anion transmembrane transporter activity 2.77148301796671 bayes_pls_golite062009
peptide transporter activity 2.75577307623285 bayes_pls_golite062009
molybdate ion transmembrane transporter activity 2.58578176144479 bayes_pls_golite062009
molybdate transmembrane-transporting ATPase activity 2.58578176144479 bayes_pls_golite062009
hydrolase activity 2.41680852416007 bayes_pls_golite062009
amine binding 2.37157043664258 bayes_pls_golite062009
amino acid binding 2.19962484683312 bayes_pls_golite062009
oligopeptide transporter activity 1.91036692266394 bayes_pls_golite062009
ion transmembrane transporter activity 1.70693655091183 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.70643051049474 bayes_pls_golite062009
pyrophosphatase activity 1.65646853917778 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.63520066802961 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.6341518946909 bayes_pls_golite062009
binding 1.54172013140566 bayes_pls_golite062009
amino acid transmembrane transporter activity 1.46567992263504 bayes_pls_golite062009
amino acid-transporting ATPase activity 0.991822522006045 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.99134553005852 bayes_pls_golite062009
putrescine binding 0.973416867423461 bayes_pls_golite062009
amine-transporting ATPase activity 0.971052093204841 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.230402103022499 bayes_pls_golite062009
cation transmembrane transporter activity 0.119916745111395 bayes_pls_golite062009
sulfate transmembrane-transporting ATPase activity 0.0940079640524907 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 0.00844917716785965 bayes_pls_golite062009

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