| Protein: | ELP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 788 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELP2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [60..744] | [865..1491] |
|
|
0.0 | [5..705] | [1045..1683] |
|
Region A: Residues: [1-542] |
1 11 21 31 41 51
| | | | | |
1 MVECITPEAI FIGANKQTQV SDIHKVKKIV AFGAGKTIAL WDPIEPNNKG VYATLKGHEA 60
61 EVTCVRFVPD SDFMVSASED HHVKIWKFTD YSHLQCIQTI QHYSKTIVAL SALPSLISVG 120
121 CADGTISIWR QNIQNDEFGL AHEFTIKKGF FYPLCLSLSK VEEKKYLLAI GGTNVNVFIA 180
181 SFILSDSGIE KCRVVAELEG HEDWVKSLAF RHQETPGDYL LCSGSQDRYI RLWRIRINDL 240
241 IDDSEEDSKK LTLLSNKQYK FQIDDELRVG INFEALIMGH DDWISSLQWH ESRLQLLAAT 300
301 ADTSLMVWEP DETSGIWVCS LRLGEMSSKG ASTATGSSGG FWSCLWFTHE RMDFFLTNGK 360
361 TGSWRMWATK DNIICDQRLG ISGATKDVTD IAWSPSGEYL LATSLDQTTR LFAPWIYDAS 420
421 GRKREIATWH EFSRPQIHGY DMICVETVTD TRFVSGGDEK ILRSFDLPKG VAGMLQKFVG 480
481 IQFEEKSEMP DSATVPVLGL SNKAGEDDAN EDDEEEEGGN KETPDITDPL SLLECPPMED 540
541 QL
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 1k32A_ |
| Description: | Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [543-634] |
1 11 21 31 41 51
| | | | | |
1 QRHLLWPEVE KLYGHGFEIT CLDISPDQKL IASACRSNNV QNAVIRIFST ENWLEIKPAL 60
61 PFHSLTITRL KFSKDGKFLL SVCRDRKWAL WE
|
| Detection Method: | |
| Confidence: | 90.927757 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.31804728298431 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.13054264433898 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 3.00646122159505 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| 2.40807791198019 | bayes_pls_golite062009 | |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.17819869145391 | bayes_pls_golite062009 |
| dynactin binding | 1.85146647785657 | bayes_pls_golite062009 |
| snoRNA binding | 1.76991421703041 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| actin filament binding | 1.5197243426595 | bayes_pls_golite062009 |
| RNA binding | 1.50295916950465 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.4866444894826 | bayes_pls_golite062009 |
| hydrolase activity | 1.36960741137363 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.21305848427711 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| ligase activity | 0.93058496790047 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
| transcription repressor activity | 0.658573452658359 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| molecular transducer activity | 0.367729389382533 | bayes_pls_golite062009 |
| signal transducer activity | 0.367729389382533 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.182612389752591 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
|
Region A: Residues: [635-711] |
1 11 21 31 41 51
| | | | | |
1 RNMEDNTFEL RFKNEKPHTR IIWDADWAPL EFGNVFVTAS RDKTVKVWRH QKEPADDYVL 60
61 EASIKHTKAV TAISIHD
|
| Detection Method: | |
| Confidence: | 136.9897 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [712-788] |
1 11 21 31 41 51
| | | | | |
1 SMIREKILIS VGLENGEIYL YSYTLGKFEL ITQLNEDITP ADKITRLRWS HLKRNGKLFL 60
61 GVGSSDLSTR IYSLAYE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.897 | 0.479 | regulation of transcription from RNA polymerase II promoter | b.1.1 | Immunoglobulin |
