| Protein: | KIP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 805 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..805] | [1..805] |
|
|
0.0 | [114..736] | [5..676] |
|
|
0.0 | [113..734] | [2..667] |
|
|
0.0 | [113..731] | [2..643] |
|
|
0.0 | [102..741] | [2..689] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MNVPETRQSS IVVAIRVRPF TSMEKTRLVN EASGAEANFP GLGDSSLILP MSNNSDSDID 60
61 IDAEEGSTRS KRNSLLRRKV IRPEGIRKIV DCVDDRMLIF D
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-466] |
1 11 21 31 41 51
| | | | | |
1 PADRNPLNKV SDQVLNSMRA RATKATASSI NNSNATNKFS SQRRRHGGEI KFVFDKLFDE 60
61 TSSQARVYKE TTSPLLDSVL DGFNSTVFAY GATGCGKTYT VSGTPSQPGI IFLAMEELFN 120
121 KITDLKDEKD FEISLSYLEI YNERIRDLLK PETPSKRLVI REDTQNHIKV ANLSYHHPNT 180
181 VEDVMDLVVQ GNINRTTSPT EANEVSSRSH AVLQIHIMQT NKLVDLTSQH TFATLSIIDL 240
241 AGSERAAATR NRGIRLHEGA NINRSLLALG NCINALCLND GSRSCHIPYR DSKLTRLLKF 300
301 SLGGNCKTVM IVCISPSSSH YDETLNTLKY ANRAKEIKTK IIRNQQSLSR HVGSYLKMIT 360
361 EQKRQ
|
| Detection Method: | |
| Confidence: | 636.0103 |
| Match: | 1gojA_ |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 7.68336791348661 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 4.97507344344589 | bayes_pls_golite062009 |
| tubulin-dependent ATPase activity | 4.65311977287923 | bayes_pls_golite062009 |
| microfilament motor activity | 4.176620576177 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 2.77140616759165 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.71138928021716 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| nucleic acid binding | 1.84541587592638 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| DNA binding | 1.48341220422804 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.40384549325664 | bayes_pls_golite062009 |
| transcription regulator activity | 1.30136714640988 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.07479235523606 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.58184133092316 | bayes_pls_golite062009 |
| kinetochore binding | 0.505370954958131 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.399434758448606 | bayes_pls_golite062009 |
| GTP binding | 0.398333597279278 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.39332178627529 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| guanylate kinase activity | 0.36604371735126 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| transcription factor activity | 0.341088753451767 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| transcription repressor activity | 0.244736544804496 | bayes_pls_golite062009 |
| helicase activity | 0.243380876721902 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| protein transporter activity | 0.178442534411253 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.13866566261611 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0102645529518819 | bayes_pls_golite062009 |
|
Region A: Residues: [467-805] |
1 11 21 31 41 51
| | | | | |
1 IEELREREEK MISLKLTKYK LNKEKIQLAI NECVNRVQQT YAGVETYQVA KTLKSLILCK 60
61 RRFLQMVKLE VDNLILLFER EESTAAEMQP VISNCRMISG QLYNKIHELE MKFDETDTLS 120
121 SVIHQVHSID LNKLREMEDW DETYDLVYLE SCLNQISELQ RNEILVNSSI MTEKLMSDPG 180
181 LNSRFKFLSK WLMNRTPNIE SIIQDLVHID EEFESFARTF IANPDSNFTN TNINIINTTA 240
241 ADLAVPAETL QRQNFSQKKV KWTSPDLSPS PMIEPQPELE PELHQDQDAI ASEVDVSMQD 300
301 TTFNEQGPST PSAPTTAVPR RKMRSSLLTH QSLLATARK
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| Detection Method: | |
| Confidence: | 12.39794 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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