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View Structure Prediction Details

Protein: gi|30258874, gi|...
Organism: Bacillus anthracis str. Ames
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258874, gi|....

Description E-value Query
Range
Subject
Range
gi|110801642, gi... - gi|110801642|ref|YP_698644.1| amino acid ABC transporter (binding protein) [Clostridium perfringens ...
2.0E-55 [1..258] [1..259]
gi|51974813, gi|... - gi|52141344|ref|YP_085485.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus...
3.0E-53 [1..259] [1..259]
gi|42783271, gi|... - gi|42783271|ref|NP_980518.1| amino acid ABC transporter, amino acid-binding protein [Bacillus cereus...
gi|228608498, gi... - gi|229174830|ref|ZP_04302350.1| Arginine-binding extracellular protein artP [Bacillus cereus MM3], g...
6.0E-53 [1..259] [1..259]
gi|229129434, gi... - gi|229129434|ref|ZP_04258405.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-Ce...
gi|29897791, gi|... - gi|30022234|ref|NP_833865.1| arginine-binding protein [Bacillus cereus ATCC 14579], gi|29897791|gb|A...
3.0E-52 [1..259] [1..259]
gi|163864101, gi... - gi|89207954|ref|ZP_01186481.1| extracellular solute-binding protein, family 3 [Bacillus weihenstepha...
gi|229134969, gi... - gi|229134969|ref|ZP_04263775.1| Arginine-binding extracellular protein artP [Bacillus cereus BDRD-ST...
4.0E-52 [1..259] [1..259]
gi|76587129, gi|... - gi|76797499|ref|ZP_00779808.1| extracellular solute-binding protein, family 3 [Thermoanaerobacter et...
2.0E-51 [13..256] [1..246]
gi|18144986, gi|... - gi|18310306|ref|NP_562240.1| amino acid ABC transporter [Clostridium perfringens str. 13], gi|181449...
3.0E-51 [1..258] [1..259]
gi|77957941 - gi|77957941|ref|ZP_00821984.1| COG0834: ABC-type amino acid transport/signal transduction systems, p...
6.0E-51 [2..258] [7..263]
gi|238717579, gi... - gi|77961132|ref|ZP_00824978.1| COG0834: ABC-type amino acid transport/signal transduction systems, p...
1.0E-50 [2..258] [13..269]
gi|77979904 - gi|77979904|ref|ZP_00835320.1| COG0834: ABC-type amino acid transport/signal transduction systems, p...
1.0E-50 [2..258] [13..269]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLSISFA LILIVSMFSA CSNGEEKATG KNKKVLVMGT SADYKPYEYV EASKSDEIIG  60
   61 FDVDVAKYIG KELGYEVKVK DMDFGGLLAS LSSGKVDFVM AGMTPTAERK NNVDFTDIYF 120
  121 VAKNMVVSKK DSNIKSVEDL KGKKVGVQTG SIQEEKAAEF KKQVDFKVEG RDRIPEIVQE 180
  181 IKAGRFDAAI IEDTVAKNYL EKMKDLQGIE IKEAPEEVGA AIALPKNSDK TAEFNKVIKK 240
  241 MQENGEMDKL VKKWFGSEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 1hpbP
Description: Histidine-binding protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ATPase activity, coupled to transmembrane movement of substances 5.10369591387353 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 5.10318083615538 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 5.10318083615538 bayes_pls_golite062009
active transmembrane transporter activity 5.08926597039825 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 5.08835444171664 bayes_pls_golite062009
primary active transmembrane transporter activity 5.0778580713249 bayes_pls_golite062009
ATPase activity, coupled 4.39934929410381 bayes_pls_golite062009
transporter activity 4.36277471796561 bayes_pls_golite062009
amine transmembrane transporter activity 4.06067446901213 bayes_pls_golite062009
transmembrane transporter activity 4.05122336499684 bayes_pls_golite062009
ATPase activity 4.04125376161476 bayes_pls_golite062009
organic acid transmembrane transporter activity 4.00950407295699 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 4.00681079961203 bayes_pls_golite062009
polyamine transmembrane transporter activity 3.56664180812545 bayes_pls_golite062009
substrate-specific transporter activity 3.47889550245964 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 3.25040168593981 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 3.16446457499691 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.87472545473244 bayes_pls_golite062009
polyamine-transporting ATPase activity 2.84609722276735 bayes_pls_golite062009
amino acid binding 2.79295963421917 bayes_pls_golite062009
anion transmembrane transporter activity 2.77148301796671 bayes_pls_golite062009
peptide transporter activity 2.75577307623285 bayes_pls_golite062009
molybdate transmembrane-transporting ATPase activity 2.58578176144479 bayes_pls_golite062009
molybdate ion transmembrane transporter activity 2.58578176144479 bayes_pls_golite062009
amino acid transmembrane transporter activity 2.47628874886983 bayes_pls_golite062009
hydrolase activity 2.41680852416007 bayes_pls_golite062009
amine binding 2.37157043664258 bayes_pls_golite062009
polyamine binding 2.27573366139794 bayes_pls_golite062009
oligopeptide transporter activity 1.91036692266394 bayes_pls_golite062009
ion transmembrane transporter activity 1.70693655091183 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.70643051049474 bayes_pls_golite062009
pyrophosphatase activity 1.65646853917778 bayes_pls_golite062009
amino acid-transporting ATPase activity 1.65232476690022 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.63520066802961 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.6341518946909 bayes_pls_golite062009
amine-transporting ATPase activity 1.59812090922796 bayes_pls_golite062009
binding 1.54172013140566 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.99134553005852 bayes_pls_golite062009
catalytic activity 0.674312982669564 bayes_pls_golite062009
neutral amino acid transmembrane transporter activity 0.36821604053554 bayes_pls_golite062009
L-amino acid transmembrane transporter activity 0.29324308961663 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.230402103022499 bayes_pls_golite062009
putrescine transmembrane transporter activity 0.212254208912362 bayes_pls_golite062009
cation transmembrane transporter activity 0.119916745111395 bayes_pls_golite062009
sulfate transmembrane-transporting ATPase activity 0.0940079640524907 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 0.00844917716785965 bayes_pls_golite062009

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