| Protein: | SWC4_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 476 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWC4_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..476] | [1..476] |
|
|
0.0 | [1..467] | [1..381] |
|
|
2.0E-98 | [2..298] | [31..314] |
|
|
7.0E-95 | [2..298] | [3..286] |
|
|
1.0E-81 | [6..283] | [2..253] |
|
|
2.0E-68 | [1..278] | [1..248] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MSSSDIFDVL NIKQKSRSPT NGQVSVPSSS AANRPKPQVT GMQRELFNLL GENQPPVVIK 60
61 SGNNFKEKML STSKPSPWSF VEFKANNSVT LRHWVKGSKE LIGDTPKESP YSKFNQHLSI 120
121 PSFTKEEYEA FMNENEGTQK SVESEKNHNE NFTNEKKDES
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [161-221] |
1 11 21 31 41 51
| | | | | |
1 KNSWSFEEIE YLFNLCKKYD LRWFLIFDRY SYNNSRTLED LKEKFYYTCR NYFKASDPSN 60
61 P
|
| Detection Method: | |
| Confidence: | 3.568636 |
| Match: | PF00249 |
| Description: | Myb-like DNA-binding domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| histone acetyltransferase activity | 5.78270240334849 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.78270240334849 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.53404381270892 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.38345537045529 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.81897719505269 | bayes_pls_golite062009 |
| acyltransferase activity | 3.35931919126926 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.31384699789032 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.09869056563841 | bayes_pls_golite062009 |
| transcription regulator activity | 3.05971315776284 | bayes_pls_golite062009 |
| DNA binding | 2.98143466641891 | bayes_pls_golite062009 |
| nucleic acid binding | 2.85666780317594 | bayes_pls_golite062009 |
| binding | 2.77786931095369 | bayes_pls_golite062009 |
| transcription factor activity | 2.3234819540139 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.5871271401402 | bayes_pls_golite062009 |
| chromatin binding | 1.46306211220814 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.23729321119532 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.23476914879396 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.18710646783152 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.02200659886159 | bayes_pls_golite062009 |
| protein binding | 1.00288283679871 | bayes_pls_golite062009 |
| transcription repressor activity | 0.700409976805769 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.658518317984762 | bayes_pls_golite062009 |
| transcription activator activity | 0.58607600202198 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.559482273209868 | bayes_pls_golite062009 |
| deacetylase activity | 0.534082291544628 | bayes_pls_golite062009 |
| histone binding | 0.489784140732052 | bayes_pls_golite062009 |
| transcription factor binding | 0.270053518126008 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.244471307852075 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.233668696331578 | bayes_pls_golite062009 |
| DNA helicase activity | 0.192832786095412 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.151335943405565 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0110175210304684 | bayes_pls_golite062009 |
|
Region A: Residues: [222-476] |
1 11 21 31 41 51
| | | | | |
1 LLSSLNFSAE KEIERKKYLQ RLLSRSAAEI AEEEALVVES KKFEMAAKRT LAERESLLRL 60
61 LDSPHSDQTI TQYLTSQGMS QLYNALLADK TRKRKHDLNI PENPWMKQQQ QFAQHRQLQQ 120
121 LNVKKSEVKE NLSPKKTKRQ RQEMQTALKR KSESAYAEQL LKDFNSDERK ALGVITHGEK 180
181 LSPGVYLRST KLSTFKPALQ NKILAILQEL SLPSRPVMPS FDVMERQEEL LKKINTLIDL 240
241 KKHVDKYEAG MSITK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
