| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.745321355829] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CCE1 |
|
|
|
| NUC1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial inner membrane | 7.6048E-4 | 2 | 174 | 2 | 6292 |
| organelle inner membrane | 8.5997E-4 | 2 | 185 | 2 | 6292 |
| mitochondrial membrane | 1.7808E-3 | 2 | 266 | 2 | 6292 |
| mitochondrial envelope | 2.4514E-3 | 2 | 312 | 2 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
| organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA recombination | 3.2544E-4 | 2 | 114 | 2 | 6292 |
| cell death | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| apoptosis | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| death | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| programmed cell death | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| DNA catabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| DNA metabolic process | 8.631E-3 | 2 | 585 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endodeoxyribonuclease activity | 1.1672E-5 | 2 | 22 | 2 | 6292 |
| deoxyribonuclease activity | 2.0514E-5 | 2 | 29 | 2 | 6292 |
| endonuclease activity | 9.2464E-5 | 2 | 61 | 2 | 6292 |
| nuclease activity | 9.9543E-4 | 2 | 199 | 2 | 6292 |
| exodeoxyribonuclease activity | 2.859E-3 | 2 | 9 | 1 | 6292 |
| hydrolase activity, acting on ester bonds | 2.929E-3 | 2 | 341 | 2 | 6292 |