From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.471792816534] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
proton-transporting ATP synthase, catalytic core | 6.3568E-4 | 2 | 2 | 1 | 6292 |
mitochondrial proton-transporting ATP synthase, catalytic core | 6.3568E-4 | 2 | 2 | 1 | 6292 |
proton-transporting ATP synthase complex, catalytic core F(1) | 1.5888E-3 | 2 | 5 | 1 | 6292 |
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.5888E-3 | 2 | 5 | 1 | 6292 |
proton-transporting two-sector ATPase complex, catalytic domain | 4.1283E-3 | 2 | 13 | 1 | 6292 |
mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
mitochondrial proton-transporting ATP synthase complex | 6.3477E-3 | 2 | 20 | 1 | 6292 |
proton-transporting ATP synthase complex | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
NADH dehydrogenase (ubiquinone) activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
NADH dehydrogenase (quinone) activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 6.3568E-4 | 2 | 2 | 1 | 6292 |
NADH dehydrogenase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
hydrogen ion transporting ATP synthase activity, rotational mechanism | 4.7627E-3 | 2 | 15 | 1 | 6292 |
oxidoreductase activity, acting on NADH or NADPH | 6.6645E-3 | 2 | 21 | 1 | 6292 |