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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rad27. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

PCNA complex 3.1786E-4 2 1 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication 3.791E-4 2 123 2 6292
DNA repair 9.2646E-4 2 192 2 6292
DNA synthesis involved in DNA repair 1.2712E-3 2 4 1 6292
response to DNA damage stimulus 1.4011E-3 2 236 2 6292
cellular response to stress 2.1173E-3 2 290 2 6292
mutagenesis 2.859E-3 2 9 1 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
base-excision repair 3.811E-3 2 12 1 6292
leading strand elongation 4.7627E-3 2 15 1 6292
postreplication repair 5.7138E-3 2 18 1 6292
lagging strand elongation 5.7138E-3 2 18 1 6292
response to stress 6.2277E-3 2 497 2 6292
double-strand break repair via nonhomologous end joining 7.9314E-3 2 25 1 6292
mismatch repair 8.5646E-3 2 27 1 6292
DNA metabolic process 8.631E-3 2 585 2 6292
DNA strand elongation 9.8303E-3 2 31 1 6292
DNA strand elongation involved in DNA replication 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA polymerase processivity factor activity 3.1786E-4 2 1 1 6292
5'-flap endonuclease activity 1.5888E-3 2 5 1 6292
endodeoxyribonuclease activity, producing 5'-phosphomonoesters 1.5888E-3 2 5 1 6292
flap endonuclease activity 1.5888E-3 2 5 1 6292
endodeoxyribonuclease activity 6.9813E-3 2 22 1 6292
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 7.2981E-3 2 23 1 6292
deoxyribonuclease activity 9.1975E-3 2 29 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle