YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ydr219c. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin ligase complex 1.3628E-4 3 43 2 6292
extrinsic to mitochondrial outer membrane 4.768E-4 3 1 1 6292
RAVE complex 1.4299E-3 3 3 1 6292
CBF3 complex 1.9063E-3 3 4 1 6292
SCF ubiquitin ligase complex 5.2364E-3 3 11 1 6292
extrinsic to organelle membrane 5.7116E-3 3 12 1 6292
cullin-RING ubiquitin ligase complex 6.6614E-3 3 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

centromere complex assembly 1.4299E-3 3 3 1 6292
kinetochore assembly 1.4299E-3 3 3 1 6292
kinetochore organization 1.4299E-3 3 3 1 6292
modification-dependent protein catabolic process 1.8027E-3 3 156 2 6292
ubiquitin-dependent protein catabolic process 1.8027E-3 3 156 2 6292
proteolysis involved in cellular protein catabolic process 1.8723E-3 3 159 2 6292
modification-dependent macromolecule catabolic process 1.9912E-3 3 164 2 6292
cellular protein catabolic process 2.1638E-3 3 171 2 6292
proteolysis 2.612E-3 3 188 2 6292
protein catabolic process 2.6396E-3 3 189 2 6292
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 3.3344E-3 3 7 1 6292
protein neddylation 3.3344E-3 3 7 1 6292
cellular macromolecule catabolic process 5.1545E-3 3 265 2 6292
protein ubiquitination during ubiquitin-dependent protein catabolic process 5.2364E-3 3 11 1 6292
regulation of protein complex assembly 5.2364E-3 3 11 1 6292
macromolecule catabolic process 6.3267E-3 3 294 2 6292
regulation of cellular component biogenesis 8.5592E-3 3 18 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA replication origin binding 6.1865E-3 3 13 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle