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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
RFC1
  • DNA replication factor C complex
    		•
  • DNA repair
  • leading strand elongation
  • mismatch repair
    		•
  • DNA clamp loader activity
    		•
    RFC2
  • DNA replication factor C complex
    		•
  • sister chromatid cohesion
  • cell cycle checkpoint
  • leading strand elongation
  • mismatch repair
    		•
  • DNA clamp loader activity
  • purine nucleotide binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    DNA replication factor C complex 2.779E-6 2 11 2 6292
    replication fork 4.3504E-5 2 42 2 6292
    chromosomal part 1.413E-3 2 237 2 6292
    chromosome 1.8898E-3 2 274 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    leading strand elongation 5.3053E-6 2 15 2 6292
    mismatch repair 1.7735E-5 2 27 2 6292
    DNA strand elongation 2.3495E-5 2 31 2 6292
    DNA strand elongation involved in DNA replication 2.3495E-5 2 31 2 6292
    DNA-dependent DNA replication 1.678E-4 2 82 2 6292
    DNA replication 3.791E-4 2 123 2 6292
    DNA repair 9.2646E-4 2 192 2 6292
    response to DNA damage stimulus 1.4011E-3 2 236 2 6292
    cellular response to stress 2.1173E-3 2 290 2 6292
    cellular response to stimulus 3.6193E-3 2 379 2 6292
    response to stress 6.2277E-3 2 497 2 6292
    DNA metabolic process 8.631E-3 2 585 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein-DNA loading ATPase activity 1.0611E-6 2 7 2 6292
    DNA clamp loader activity 1.0611E-6 2 7 2 6292
    DNA-dependent ATPase activity 7.5032E-5 2 55 2 6292
    ATPase activity, coupled 5.5711E-4 2 149 2 6292
    ATPase activity 1.1194E-3 2 211 2 6292
    DNA binding 1.6492E-3 2 256 2 6292
    nucleoside-triphosphatase activity 2.7262E-3 2 329 2 6292
    hydrolase activity, acting on acid anhydrides 3.1391E-3 2 353 2 6292
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.1391E-3 2 353 2 6292
    pyrophosphatase activity 3.1391E-3 2 353 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle