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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mating projection base 3.3344E-3 3 7 1 6292
protein phosphatase type 1 complex 3.3344E-3 3 7 1 6292
cytosol 5.9093E-3 3 284 2 6292
mRNA cleavage and polyadenylation specificity factor complex 7.136E-3 3 15 1 6292
protein serine/threonine phosphatase complex 8.0849E-3 3 17 1 6292
mRNA cleavage factor complex 9.5071E-3 3 20 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sexual sporulation 9.3124E-4 3 112 2 6292
sexual sporulation resulting in formation of a cellular spore 9.3124E-4 3 112 2 6292
cell development 9.3124E-4 3 112 2 6292
ascospore formation 9.3124E-4 3 112 2 6292
histone dephosphorylation 9.5344E-4 3 2 1 6292
sporulation 1.1594E-3 3 125 2 6292
sporulation resulting in formation of a cellular spore 1.1594E-3 3 125 2 6292
anatomical structure formation involved in morphogenesis 1.2346E-3 3 129 2 6292
reproductive process in single-celled organism 1.3318E-3 3 134 2 6292
cell differentiation 1.6234E-3 3 148 2 6292
energy derivation by oxidation of organic compounds 1.6453E-3 3 149 2 6292
reproductive developmental process 1.6895E-3 3 151 2 6292
generation of precursor metabolites and energy 2.8085E-3 3 195 2 6292
reproductive cellular process 3.2839E-3 3 211 2 6292
reproductive process 3.3148E-3 3 212 2 6292
reproduction of a single-celled organism 3.4715E-3 3 217 2 6292
sexual reproduction 3.9966E-3 3 233 2 6292
termination of RNA polymerase II transcription, poly(A)-independent 4.2857E-3 3 9 1 6292
cell morphogenesis during vegetative growth 4.2857E-3 3 9 1 6292
termination of RNA polymerase II transcription, poly(A)-coupled 4.7611E-3 3 10 1 6292
anatomical structure morphogenesis 4.8516E-3 3 257 2 6292
anatomical structure development 4.9641E-3 3 260 2 6292
cellular developmental process 5.5854E-3 3 276 2 6292
'de novo' IMP biosynthetic process 7.6106E-3 3 16 1 6292
reproduction 7.8481E-3 3 328 2 6292
developmental process 7.9899E-3 3 331 2 6292
IMP biosynthetic process 8.0849E-3 3 17 1 6292
IMP metabolic process 8.0849E-3 3 17 1 6292
purine ribonucleoside monophosphate biosynthetic process 9.0332E-3 3 19 1 6292
termination of RNA polymerase II transcription 9.0332E-3 3 19 1 6292
purine nucleoside monophosphate biosynthetic process 9.5071E-3 3 20 1 6292
ribonucleoside monophosphate biosynthetic process 9.5071E-3 3 20 1 6292
negative regulation of nuclear division 9.9809E-3 3 21 1 6292
negative regulation of mitotic metaphase/anaphase transition 9.9809E-3 3 21 1 6292
mitotic cell cycle spindle assembly checkpoint 9.9809E-3 3 21 1 6292
negative regulation of mitosis 9.9809E-3 3 21 1 6292
spindle assembly checkpoint 9.9809E-3 3 21 1 6292
transcription termination 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.4299E-3 3 3 1 6292
IMP cyclohydrolase activity 1.4299E-3 3 3 1 6292
6-phosphogluconolactonase activity 2.3825E-3 3 5 1 6292
hydrolase activity 3.0267E-3 3 911 3 6292
hydroxymethyl-, formyl- and related transferase activity 3.3344E-3 3 7 1 6292
glycine hydroxymethyltransferase activity 4.7611E-3 3 10 1 6292
cyclohydrolase activity 4.7611E-3 3 10 1 6292
hydrolase activity, acting on ester bonds 8.4714E-3 3 341 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle