| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| alpha DNA polymerase:primase complex | 8.4345E-10 | 3 | 7 | 3 | 6292 |
| nuclear replisome | 1.9664E-8 | 3 | 18 | 3 | 6292 |
| replisome | 1.9664E-8 | 3 | 18 | 3 | 6292 |
| nuclear replication fork | 2.7472E-8 | 3 | 20 | 3 | 6292 |
| replication fork | 2.7665E-7 | 3 | 42 | 3 | 6292 |
| protein-DNA complex | 7.0513E-7 | 3 | 57 | 3 | 6292 |
| nuclear chromosome part | 2.7115E-5 | 3 | 190 | 3 | 6292 |
| nuclear chromosome | 4.698E-5 | 3 | 228 | 3 | 6292 |
| chromosomal part | 5.2792E-5 | 3 | 237 | 3 | 6292 |
| chromosome | 8.1719E-5 | 3 | 274 | 3 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lagging strand elongation | 1.9664E-8 | 3 | 18 | 3 | 6292 |
| DNA strand elongation | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| DNA strand elongation involved in DNA replication | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| DNA replication initiation | 1.3148E-7 | 3 | 33 | 3 | 6292 |
| DNA-dependent DNA replication | 2.1342E-6 | 3 | 82 | 3 | 6292 |
| DNA replication | 7.2927E-6 | 3 | 123 | 3 | 6292 |
| DNA metabolic process | 7.9998E-4 | 3 | 585 | 3 | 6292 |
| DNA synthesis involved in DNA repair | 1.9063E-3 | 3 | 4 | 1 | 6292 |
| DNA replication, synthesis of RNA primer | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| telomere capping | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| premeiotic DNA synthesis | 2.3825E-3 | 3 | 5 | 1 | 6292 |
| cellular macromolecule biosynthetic process | 6.7003E-3 | 3 | 1187 | 3 | 6292 |
| macromolecule biosynthetic process | 6.7343E-3 | 3 | 1189 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleotidyltransferase activity | 1.8706E-5 | 3 | 168 | 3 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 2.9545E-4 | 3 | 420 | 3 | 6292 |
| DNA-directed DNA polymerase activity | 8.9832E-4 | 3 | 110 | 2 | 6292 |
| DNA primase activity | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| DNA polymerase activity | 9.8171E-4 | 3 | 115 | 2 | 6292 |
| transferase activity | 2.0257E-3 | 3 | 797 | 3 | 6292 |
| DNA binding | 4.8144E-3 | 3 | 256 | 2 | 6292 |