| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 4.2679E-8 | 3 | 23 | 3 | 6292 |
| chromatin remodeling complex | 3.7798E-6 | 3 | 99 | 3 | 6292 |
| nucleoplasm part | 5.8345E-5 | 3 | 245 | 3 | 6292 |
| nucleoplasm | 7.3064E-5 | 3 | 264 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase activity | 1.1953E-7 | 3 | 32 | 3 | 6292 |
| protein deacetylase activity | 1.1953E-7 | 3 | 32 | 3 | 6292 |
| deacetylase activity | 1.5773E-7 | 3 | 35 | 3 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 4.1681E-7 | 3 | 48 | 3 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.9799E-6 | 3 | 80 | 3 | 6292 |
| hydrolase activity | 3.0267E-3 | 3 | 911 | 3 | 6292 |