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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

spliceosomal complex 2.6246E-12 8 45 6 6292
ribonucleoprotein complex 7.018E-6 8 514 6 6292
macromolecular complex 4.9027E-4 8 1635 7 6292
nuclear part 5.8147E-4 8 1103 6 6292
organelle part 4.4856E-3 8 2282 7 6292
intracellular organelle part 4.4856E-3 8 2282 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 1.5229E-12 8 99 7 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.6372E-12 8 100 7 6292
RNA splicing, via transesterification reactions 2.6644E-12 8 107 7 6292
RNA splicing 1.1999E-11 8 132 7 6292
mRNA processing 3.9491E-11 8 156 7 6292
mRNA metabolic process 3.5957E-10 8 213 7 6292
RNA processing 2.1096E-8 8 380 7 6292
RNA metabolic process 1.2557E-5 8 954 7 6292
gene expression 9.518E-5 8 1283 7 6292
nucleic acid metabolic process 1.8497E-4 8 1415 7 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 3.6683E-4 8 1566 7 6292
cellular nitrogen compound metabolic process 8.3438E-4 8 1770 7 6292
nitrogen compound metabolic process 9.0281E-4 8 1791 7 6292
cis assembly of pre-catalytic spliceosome 2.5415E-3 8 2 1 6292
cell cycle 2.5551E-3 8 525 4 6292
nuclear mRNA cis splicing, via spliceosome 3.8101E-3 8 3 1 6292
cellular macromolecule metabolic process 4.5244E-3 8 2285 7 6292
macromolecule metabolic process 5.4192E-3 8 2349 7 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

first spliceosomal transesterification activity 1.6077E-11 8 6 4 6292
second spliceosomal transesterification activity 2.9615E-5 8 7 2 6292

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