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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear condensin complex 8.4345E-10 3 7 3 6292
condensin complex 8.4345E-10 3 7 3 6292
condensed nuclear chromosome 2.4663E-6 3 86 3 6292
condensed chromosome 3.2303E-6 3 94 3 6292
nuclear chromosome part 2.7115E-5 3 190 3 6292
nuclear chromosome 4.698E-5 3 228 3 6292
chromosomal part 5.2792E-5 3 237 3 6292
chromosome 8.1719E-5 3 274 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitotic chromosome condensation 3.9763E-9 3 11 3 6292
chromosome condensation 6.8922E-9 3 13 3 6292
DNA packaging 1.1953E-7 3 32 3 6292
DNA conformation change 7.4359E-7 3 58 3 6292
mitotic sister chromatid segregation 1.1028E-6 3 66 3 6292
sister chromatid segregation 1.2626E-6 3 69 3 6292
mitosis 4.3885E-6 3 104 3 6292
nuclear division 4.6491E-6 3 106 3 6292
organelle fission 5.6424E-6 3 113 3 6292
chromosome segregation 8.2267E-6 3 128 3 6292
M phase of mitotic cell cycle 8.2267E-6 3 128 3 6292
mitotic cell cycle 6.5817E-5 3 255 3 6292
M phase 1.0103E-4 3 294 3 6292
cell cycle phase 2.118E-4 3 376 3 6292
cell cycle process 4.6964E-4 3 490 3 6292
cell cycle 5.7787E-4 3 525 3 6292
chromosome organization 6.8292E-4 3 555 3 6292
organelle organization 5.734E-3 3 1127 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AT DNA binding 1.4299E-3 3 3 1 6292
ATPase activity 3.2839E-3 3 211 2 6292
DNA secondary structure binding 4.2857E-3 3 9 1 6292
nucleoside-triphosphatase activity 7.8952E-3 3 329 2 6292
hydrolase activity, acting on acid anhydrides 9.067E-3 3 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.067E-3 3 353 2 6292
pyrophosphatase activity 9.067E-3 3 353 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle