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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

epsilon DNA polymerase complex 1.5888E-3 2 5 1 6292
DNA polymerase complex 3.1764E-3 2 10 1 6292
nuclear replisome 5.7138E-3 2 18 1 6292
replisome 5.7138E-3 2 18 1 6292
nuclear replication fork 6.3477E-3 2 20 1 6292
nucleotide-excision repair complex 6.6645E-3 2 21 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA synthesis involved in DNA repair 1.2712E-3 2 4 1 6292
cellular response to stress 2.1173E-3 2 290 2 6292
signal transduction during filamentous growth 2.5415E-3 2 8 1 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
MAPKKK cascade involved in osmosensory signaling pathway 4.1283E-3 2 13 1 6292
leading strand elongation 4.7627E-3 2 15 1 6292
lagging strand elongation 5.7138E-3 2 18 1 6292
response to stress 6.2277E-3 2 497 2 6292
osmosensory signaling pathway 6.6645E-3 2 21 1 6292
MAPKKK cascade 6.6645E-3 2 21 1 6292
cellular response to abiotic stimulus 6.9813E-3 2 22 1 6292
cellular response to osmotic stress 6.9813E-3 2 22 1 6292
intracellular protein kinase cascade 7.6148E-3 2 24 1 6292
signal transmission via phosphorylation event 7.6148E-3 2 24 1 6292
mismatch repair 8.5646E-3 2 27 1 6292
regulation of conjugation with cellular fusion by signal transduction 8.5646E-3 2 27 1 6292
pheromone-dependent signal transduction involved in conjugation with cellular fusion 8.5646E-3 2 27 1 6292
DNA strand elongation 9.8303E-3 2 31 1 6292
DNA strand elongation involved in DNA replication 9.8303E-3 2 31 1 6292
G-protein coupled receptor protein signaling pathway 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SAM domain binding 9.5344E-4 2 3 1 6292
protein domain specific binding 1.2712E-3 2 4 1 6292
zinc ion binding 2.5415E-3 2 8 1 6292
double-stranded DNA binding 7.2981E-3 2 23 1 6292
transition metal ion binding 7.6148E-3 2 24 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle