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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

COPII vesicle coat 1.3495E-9 3 8 3 6292
ER to Golgi transport vesicle membrane 1.3495E-9 3 8 3 6292
transport vesicle membrane 1.0965E-8 3 15 3 6292
ER to Golgi transport vesicle 1.0832E-7 3 31 3 6292
vesicle coat 1.4421E-7 3 34 3 6292
coated vesicle membrane 1.5773E-7 3 35 3 6292
cytoplasmic vesicle membrane 1.5773E-7 3 35 3 6292
vesicle membrane 1.5773E-7 3 35 3 6292
membrane coat 2.033E-7 3 38 3 6292
coated membrane 2.033E-7 3 38 3 6292
cytoplasmic vesicle part 2.2024E-7 3 39 3 6292
transport vesicle 3.4196E-7 3 45 3 6292
coated vesicle 2.2142E-6 3 83 3 6292
membrane-bounded vesicle 4.7832E-6 3 107 3 6292
cytoplasmic vesicle 4.7832E-6 3 107 3 6292
cytoplasmic membrane-bounded vesicle 4.7832E-6 3 107 3 6292
vesicle 5.201E-6 3 110 3 6292
extrinsic to membrane 1.9226E-4 3 51 2 6292
endomembrane system 2.5131E-4 3 398 3 6292
membrane part 1.16E-3 3 662 3 6292
organelle membrane 1.3252E-3 3 692 3 6292
protein complex 5.8881E-3 3 1137 3 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

membrane budding 1.5153E-6 3 5 2 6292
ER-associated protein catabolic process 1.1188E-4 3 39 2 6292
autophagy 1.2996E-4 3 42 2 6292
vesicle organization 1.5615E-4 3 46 2 6292
vesicle-mediated transport 1.5647E-4 3 340 3 6292
cellular catabolic process 2.85E-4 3 415 3 6292
proteasomal protein catabolic process 3.5308E-4 3 69 2 6292
proteasomal ubiquitin-dependent protein catabolic process 3.5308E-4 3 69 2 6292
catabolic process 4.8714E-4 3 496 3 6292
ER to Golgi vesicle-mediated transport 5.114E-4 3 83 2 6292
modification-dependent protein catabolic process 1.8027E-3 3 156 2 6292
ubiquitin-dependent protein catabolic process 1.8027E-3 3 156 2 6292
proteolysis involved in cellular protein catabolic process 1.8723E-3 3 159 2 6292
vesicle coating 1.9063E-3 3 4 1 6292
modification-dependent macromolecule catabolic process 1.9912E-3 3 164 2 6292
Golgi vesicle transport 2.089E-3 3 168 2 6292
cellular protein catabolic process 2.1638E-3 3 171 2 6292
proteolysis 2.612E-3 3 188 2 6292
protein catabolic process 2.6396E-3 3 189 2 6292
membrane organization 2.8949E-3 3 198 2 6292
cellular membrane organization 2.8949E-3 3 198 2 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
cellular macromolecule catabolic process 5.1545E-3 3 265 2 6292
macromolecule catabolic process 6.3267E-3 3 294 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural molecule activity 8.374E-3 3 339 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle