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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
CKA1
  • protein kinase CK2 complex
  • G2/M transition of mitotic cell cycle
  • G1/S transition of mitotic cell cycle
  • flocculation via cell wall protein-carbohydrate interaction
  • protein amino acid phosphorylation
  • response to DNA damage stimulus
  • regulation of transcription from RNA polymerase III promoter
  • regulation of transcription from RNA polymerase I promoter
  • cellular ion homeostasis
  • protein kinase CK2 activity
  • CKA2
  • protein kinase CK2 complex
  • G2/M transition of mitotic cell cycle
  • G1/S transition of mitotic cell cycle
  • flocculation via cell wall protein-carbohydrate interaction
  • protein amino acid phosphorylation
  • response to DNA damage stimulus
  • regulation of transcription from RNA polymerase III promoter
  • regulation of transcription from RNA polymerase I promoter
  • cellular ion homeostasis
  • protein kinase CK2 activity
  • CKB1
  • protein kinase CK2 complex
  • G2/M transition of mitotic cell cycle
  • G1/S transition of mitotic cell cycle
  • flocculation via cell wall protein-carbohydrate interaction
  • protein amino acid phosphorylation
  • response to DNA damage stimulus
  • regulation of transcription from RNA polymerase III promoter
  • regulation of transcription from RNA polymerase I promoter
  • cellular ion homeostasis
  • protein kinase CK2 regulator activity
  • RRP7
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • ribosomal small subunit assembly
  • molecular_function
  • UTP22
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    protein kinase CK2 complex 9.6371E-10 5 4 3 6292
    nuclear outer membrane 1.7979E-3 5 86 2 6292
    nuclear membrane 2.2823E-3 5 97 2 6292
    outer membrane 7.5233E-3 5 178 2 6292
    organelle outer membrane 7.5233E-3 5 178 2 6292
    nuclear envelope 9.3452E-3 5 199 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    regulation of transcription from RNA polymerase I promoter 9.6371E-10 5 4 3 6292
    regulation of transcription from RNA polymerase III promoter 8.4265E-9 5 7 3 6292
    flocculation via cell wall protein-carbohydrate interaction 2.887E-8 5 10 3 6292
    flocculation 3.9687E-8 5 11 3 6292
    G2/M transition of mitotic cell cycle 8.7511E-7 5 29 3 6292
    transcription from RNA polymerase I promoter 9.7211E-7 5 30 3 6292
    transcription from RNA polymerase III promoter 2.016E-6 5 38 3 6292
    G1/S transition of mitotic cell cycle 4.6705E-6 5 50 3 6292
    interphase of mitotic cell cycle 3.4739E-5 5 97 3 6292
    interphase 3.4739E-5 5 97 3 6292
    protein amino acid phosphorylation 4.1609E-5 5 103 3 6292
    cellular chemical homeostasis 6.4174E-5 5 119 3 6292
    cellular ion homeostasis 6.4174E-5 5 119 3 6292
    cellular homeostasis 6.5804E-5 5 120 3 6292
    chemical homeostasis 7.0856E-5 5 123 3 6292
    ion homeostasis 7.0856E-5 5 123 3 6292
    multi-organism process 1.1119E-4 5 143 3 6292
    phosphorylation 2.1711E-4 5 179 3 6292
    phosphorus metabolic process 4.5074E-4 5 229 3 6292
    phosphate metabolic process 4.5074E-4 5 229 3 6292
    response to DNA damage stimulus 4.927E-4 5 236 3 6292
    mitotic cell cycle 6.1924E-4 5 255 3 6292
    cellular response to stress 9.043E-4 5 290 3 6292
    post-translational protein modification 1.6626E-3 5 357 3 6292
    regulation of transcription, DNA-dependent 1.6762E-3 5 358 3 6292
    regulation of RNA metabolic process 1.7454E-3 5 363 3 6292
    cell cycle phase 1.9341E-3 5 376 3 6292
    cellular response to stimulus 1.9794E-3 5 379 3 6292
    regulation of transcription 2.0564E-3 5 384 3 6292
    RNA metabolic process 2.3107E-3 5 954 4 6292
    homeostatic process 2.453E-3 5 408 3 6292
    regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.5772E-3 5 415 3 6292
    regulation of nitrogen compound metabolic process 2.5953E-3 5 416 3 6292
    regulation of gene expression 3.1553E-3 5 445 3 6292
    regulation of macromolecule biosynthetic process 3.3863E-3 5 456 3 6292
    regulation of cellular biosynthetic process 3.7412E-3 5 472 3 6292
    regulation of biosynthetic process 3.7641E-3 5 473 3 6292
    regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
    cell cycle process 4.1678E-3 5 490 3 6292
    response to stress 4.3416E-3 5 497 3 6292
    protein modification process 4.3922E-3 5 499 3 6292
    transcription, DNA-dependent 4.4943E-3 5 503 3 6292
    RNA biosynthetic process 4.6241E-3 5 508 3 6292
    regulation of primary metabolic process 4.783E-3 5 514 3 6292
    cell cycle 5.0831E-3 5 525 3 6292
    regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
    regulation of metabolic process 5.7186E-3 5 547 3 6292
    regulation of biological quality 5.8393E-3 5 551 3 6292
    transcription 5.8697E-3 5 552 3 6292
    macromolecule modification 6.4022E-3 5 569 3 6292
    gene expression 7.2106E-3 5 1283 4 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    protein kinase CK2 activity 5.0527E-7 5 2 2 6292
    obsolete_molecular_function 1.2428E-5 5 69 3 6292
    protein kinase CK2 regulator activity 1.5888E-3 5 2 1 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle