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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

plasma membrane enriched fraction 7.9466E-4 5 1 1 6292
ribosome 9.043E-4 5 290 3 6292
eukaryotic translation initiation factor 4F complex 3.1756E-3 5 4 1 6292
ribonucleoprotein complex 4.783E-3 5 514 3 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translational elongation 2.0338E-4 5 29 2 6292
regulation of translation 7.924E-4 5 57 2 6292
positive regulation of translational elongation 7.9466E-4 5 1 1 6292
posttranscriptional regulation of gene expression 9.0741E-4 5 61 2 6292
regulation of cellular protein metabolic process 1.127E-3 5 68 2 6292
regulation of protein metabolic process 1.3337E-3 5 74 2 6292
translation 1.9341E-3 5 376 3 6292
positive regulation of translation 3.1756E-3 5 4 1 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
proteasome assembly 4.7604E-3 5 6 1 6292
positive regulation of cellular protein metabolic process 5.552E-3 5 7 1 6292
positive regulation of protein metabolic process 6.3431E-3 5 8 1 6292
'de novo' protein folding 7.1338E-3 5 9 1 6292
protein refolding 7.9239E-3 5 10 1 6292
regulation of translational initiation 8.7135E-3 5 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation factor activity, nucleic acid binding 3.1605E-6 5 44 3 6292
translation elongation factor activity 2.771E-5 5 11 2 6292
ribonucleotide binding 4.092E-4 5 41 2 6292
purine ribonucleotide binding 4.092E-4 5 41 2 6292
purine nucleotide binding 6.594E-4 5 52 2 6292
fructose-bisphosphate aldolase activity 7.9466E-4 5 1 1 6292
nucleotide binding 8.4895E-4 5 59 2 6292
nucleoside-triphosphatase activity 1.3094E-3 5 329 3 6292
hydrolase activity, acting on acid anhydrides 1.6087E-3 5 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.6087E-3 5 353 3 6292
pyrophosphatase activity 1.6087E-3 5 353 3 6292
aldehyde-lyase activity 3.9682E-3 5 5 1 6292
ATPase activity, coupled 5.3152E-3 5 149 2 6292
binding 7.4489E-3 5 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle