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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

plasma membrane enriched fraction 9.5359E-4 6 1 1 6292
eukaryotic translation initiation factor 4F complex 3.8098E-3 6 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

'de novo' protein folding 4.0399E-8 6 9 3 6292
protein refolding 5.7692E-8 6 10 3 6292
proteasome assembly 1.1349E-5 6 6 2 6292
protein folding 3.5692E-5 6 78 3 6292
cellular protein metabolic process 7.4048E-4 6 1074 5 6292
chaperone-mediated protein folding 9.5359E-4 6 1 1 6292
'de novo' posttranslational protein folding 9.5359E-4 6 1 1 6292
chaperone mediated protein folding requiring cofactor 9.5359E-4 6 1 1 6292
protein metabolic process 9.7146E-4 6 1136 5 6292
cellular protein complex assembly 1.0609E-3 6 54 2 6292
response to stress 8.1759E-3 6 497 3 6292
protein complex biogenesis 8.4746E-3 6 155 2 6292
protein complex assembly 8.4746E-3 6 155 2 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATPase activity, coupled 4.3682E-6 6 149 4 6292
ATPase activity 1.7494E-5 6 211 4 6292
nucleoside-triphosphatase activity 1.0128E-4 6 329 4 6292
hydrolase activity, acting on acid anhydrides 1.3355E-4 6 353 4 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.3355E-4 6 353 4 6292
pyrophosphatase activity 1.3355E-4 6 353 4 6292
translation factor activity, nucleic acid binding 7.043E-4 6 44 2 6292
fructose-bisphosphate aldolase activity 9.5359E-4 6 1 1 6292
unfolded protein binding 1.3526E-3 6 61 2 6292
binding 1.819E-3 6 1294 5 6292
aldehyde-lyase activity 4.7604E-3 6 5 1 6292
hydrolase activity 5.1329E-3 6 911 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle