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Protein Overview: GCD2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen NTA1 GCD2 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data GCD2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..354] PSI-BLAST 4.39794 Heavy meromyosin subfragment
2 View Details [355..538] ORFEUS 9.43 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain
3 View Details [539..651] MSA 1.074992 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • translation initiation factor activity
  • 10.1099993541596 bayes_pls_golite062009
  • translation regulator activity
  • 5.74669335554405 bayes_pls_golite062009
  • catalytic activity
  • 1.31732715713197 bayes_pls_golite062009
  • nucleic acid binding
  • 1.30647139421574 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.09424756417577 bayes_pls_golite062009
  • binding
  • 0.899200492696361 bayes_pls_golite062009
  • transcription regulator activity
  • 0.888163666064903 bayes_pls_golite062009
  • DNA binding
  • 0.593071187541606 bayes_pls_golite062009
  • protein binding
  • 0.0293610121675921 bayes_pls_golite062009
  • transcription factor activity
  • 0.0259936471063739 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle