YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|23506023, gi|...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..75] PSI-BLAST 9.0 N-terminal domain of Lissencephaly-1 protein (Lis-1)
2 View Details [76..232] FFAS03 1.6 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
3 View Details [233..305] PSI-BLAST 37.39794 Crystal Structure Of The C-Terminal WD40 Domain Of Sif2
4 View Details [306..613] PSI-BLAST 84.522879 PAF-AH Holoenzyme: Lis1/Alfa2

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • 6.67009948605948 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K4 specific)
  • 4.71992275913384 bayes_pls_golite062009
  • myosin heavy chain kinase activity
  • 4.33124151198369 bayes_pls_golite062009
  • actin binding
  • 3.86142918698875 bayes_pls_golite062009
  • acetyltransferase activity
  • 3.85374902981345 bayes_pls_golite062009
  • RNA binding
  • 3.77273677738815 bayes_pls_golite062009
  • myosin II binding
  • 3.56132510021228 bayes_pls_golite062009
  • acyltransferase activity
  • 3.35098520158193 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
  • 3.31615347567536 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 3.25521258308263 bayes_pls_golite062009
  • GTPase activity
  • 3.23750443966606 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 3.14917998298348 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 3.1056443224755 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.99343906593123 bayes_pls_golite062009
  • tubulin binding
  • 2.76945430061825 bayes_pls_golite062009
  • microtubule binding
  • 2.72684103222924 bayes_pls_golite062009
  • structural molecule activity
  • 2.6914565031145 bayes_pls_golite062009
  • dynein binding
  • 2.54821997913979 bayes_pls_golite062009
  • binding
  • 2.42570478946173 bayes_pls_golite062009
  • transcription regulator activity
  • 2.3610959773142 bayes_pls_golite062009
  • nucleic acid binding
  • 2.30918780727915 bayes_pls_golite062009
  • translation initiation factor activity
  • 2.29806492548141 bayes_pls_golite062009
  • transcription repressor activity
  • 2.29049708962212 bayes_pls_golite062009
  • snoRNA binding
  • 2.27164613239345 bayes_pls_golite062009
  • protein binding
  • 2.26925404328312 bayes_pls_golite062009
  • G-protein-coupled receptor binding
  • 2.10926890165617 bayes_pls_golite062009
  • actin filament binding
  • 2.0735069176589 bayes_pls_golite062009
  • dynactin binding
  • 1.92897254169098 bayes_pls_golite062009
  • histone methyltransferase activity
  • 1.85632145559025 bayes_pls_golite062009
  • DNA binding
  • 1.71685536470455 bayes_pls_golite062009
  • receptor activity
  • 1.69781740346574 bayes_pls_golite062009
  • telomerase activity
  • 1.44665328127499 bayes_pls_golite062009
  • signal transducer activity
  • 1.42581655945599 bayes_pls_golite062009
  • molecular transducer activity
  • 1.42581655945599 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.41752877005447 bayes_pls_golite062009
  • protein methyltransferase activity
  • 1.35170368882651 bayes_pls_golite062009
  • transporter activity
  • 1.21549336905926 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • RNA-directed DNA polymerase activity
  • 1.10560669001943 bayes_pls_golite062009
  • transcription factor activity
  • 1.08768505897883 bayes_pls_golite062009
  • mRNA binding
  • 1.05053985350578 bayes_pls_golite062009
  • microtubule plus-end binding
  • 1.01166033978052 bayes_pls_golite062009
  • myosin binding
  • 0.989691178611801 bayes_pls_golite062009
  • protein transporter activity
  • 0.964340340346761 bayes_pls_golite062009
  • type 1 angiotensin receptor binding
  • 0.920323565472959 bayes_pls_golite062009
  • angiotensin receptor binding
  • 0.920323565472959 bayes_pls_golite062009
  • kinase activity
  • 0.807669232329985 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.805273887494167 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.734793983890004 bayes_pls_golite062009
  • histone binding
  • 0.685319917508843 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.676924760416604 bayes_pls_golite062009
  • transcription initiation factor activity
  • 0.656824577987243 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.634547834947756 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.625780732991652 bayes_pls_golite062009
  • protein kinase activity
  • 0.544118712921054 bayes_pls_golite062009
  • transcription factor binding
  • 0.489473003915035 bayes_pls_golite062009
  • dynein intermediate chain binding
  • 0.443846546939402 bayes_pls_golite062009
  • insulin receptor binding
  • 0.43316396073854 bayes_pls_golite062009
  • peptide binding
  • 0.387345823168967 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.30761651528651 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.28606552120995 bayes_pls_golite062009
  • DNA helicase activity
  • 0.220747580531792 bayes_pls_golite062009
  • chromatin binding
  • 0.151977098745772 bayes_pls_golite062009
  • structural constituent of cytoskeleton
  • 0.118975415284669 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 0.0803897416817422 bayes_pls_golite062009
  • receptor binding
  • 0.0390635451962911 bayes_pls_golite062009
  • kinase binding
  • 0.0366162235750993 bayes_pls_golite062009
  • protein kinase binding
  • 0.00858004043229577 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00585398682921312 bayes_pls_golite062009
  • N-methyltransferase activity
  • 0.00335766408304172 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle