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Protein Overview: CDPKH_ARATH

General Information:
Name(s) found: CDPKH_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 528 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    plasma membrane [IDA]
    Biological Process: protein amino acid phosphorylation [ISS]
    regulation of pollen tube growth [IMP]
    Molecular Function: ATP binding [IEA]
    calcium ion binding [IEA]
    calmodulin-dependent protein kinase activity [ISS]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCCSHGRD SADNGDALEN GASASNAANS TGPTAEASVP QSKHAPPSPP PATKQGPIGP  60
   61 VLGRPMEDVK ASYSLGKELG RGQFGVTHLC TQKATGHQFA CKTIAKRKLV NKEDIEDVRR 120
  121 EVQIMHHLTG QPNIVELKGA YEDKHSVHLV MELCAGGELF DRIIAKGHYS ERAAASLLRT 180
  181 IVQIVHTCHS MGVIHRDLKP ENFLLLNKDE NSPLKATDFG LSVFYKPGEV FKDIVGSAYY 240
  241 IAPEVLKRKY GPEADIWSIG VMLYILLCGV PPFWAESENG IFNAILRGHV DFSSDPWPSI 300
  301 SPQAKDLVKK MLNSDPKQRL TAAQVLNHPW IKEDGEAPDV PLDNAVMSRL KQFKAMNNFK 360
  361 KVALRVIAGC LSEEEIMGLK EMFKGMDTDS SGTITLEELR QGLAKQGTRL SEYEVQQLME 420
  421 AADADGNGTI DYGEFIAATM HINRLDREEH LYSAFQHFDK DNSGYITMEE LEQALREFGM 480
  481 NDGRDIKEII SEVDGDNDGR INYDEFVAMM RKGNPDPIPK KRRELSFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..371] PSI-BLAST 71.0 CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
    2 View Details [372..528] PSI-BLAST 25.0 Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  5.49988294224815 bayes_pls_golite062009
  • kinase activity
    		•  5.3287080791198 bayes_pls_golite062009
  • protein kinase activity
    		•  5.17195961442593 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.96052051118534 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  4.46381887831481 bayes_pls_golite062009
  • calmodulin-dependent protein kinase activity
    		•  4.31938467136214 bayes_pls_golite062009
  • transferase activity
    		•  3.97138602499442 bayes_pls_golite062009
  • binding
    		•  2.31930216202447 bayes_pls_golite062009
  • protein binding
    		•  2.276111749106 bayes_pls_golite062009
  • ATP binding
    		•  1.97600611746091 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.93596671856664 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.90928021591891 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.65732943334212 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.65726906484847 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.63763394711025 bayes_pls_golite062009
  • nucleotide binding
    		•  1.63195828048121 bayes_pls_golite062009
  • insulin receptor substrate binding
    		•  1.62657794525303 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.3898059094397 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
    		•  1.38496328649031 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  1.27291233344322 bayes_pls_golite062009
  • catalytic activity
    		•  1.21655087018101 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.1208666000428 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.829958925072404 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.802851359132363 bayes_pls_golite062009
  • DNA binding
    		•  0.663443092588472 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.58590430118616 bayes_pls_golite062009
  • transporter activity
    		•  0.553953601841147 bayes_pls_golite062009
  • tubulin binding
    		•  0.488928950975855 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
    		•  0.48345772948903 bayes_pls_golite062009
  • actin binding
    		•  0.464111806616899 bayes_pls_golite062009
  • transcription factor activity
    		•  0.434960683214736 bayes_pls_golite062009
  • MAP kinase activity
    		•  0.396857570484422 bayes_pls_golite062009
  • magnesium ion binding
    		•  0.393328812780268 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.37676337669549 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
    		•  0.37115026509016 bayes_pls_golite062009
  • transcription activator activity
    		•  0.364700429660116 bayes_pls_golite062009
  • MAP kinase kinase activity
    		•  0.35402045013148 bayes_pls_golite062009
  • protein complex binding
    		•  0.343240719858581 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.310604045041543 bayes_pls_golite062009
  • signal transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • microtubule binding
    		•  0.196718452862042 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0611721261859464 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.0556163711947139 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.00652065412910241 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle