YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: fft3 (reserved)

General Information:
Name(s) found: fft3 (reserved) / SPAC25A8.01c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • fun thirty related protein Fft3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 922 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article][IDALink to PubMed articleLink to PubMed article]
    nuclear chromatin [IDALink to PubMed article]
    chromatin remodeling complex [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    positive regulation of Ran protein signal transduction [IGILink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    DNA binding [ISSLink to PubMed article]
    DNA-dependent ATPase activity [IDALink to PubMed article]
    protein binding [IPILink to PubMed article]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGKRKIEHT ADGTHYDATS NVKRKPIFPP FIADSLSEAT EKANVMGGGM NSRLQILSEM  60
   61 SKRVQATAPI SSLEHFKQLS DISPSFTSSA NSINQPYNYS GSLENLVPTP SAGTPSQFMD 120
  121 AQNPYGAVYN ALSQFSETEP KMPSYMDDEE ASDSLPLSLS SQSLSSQVTN QKPAPHRLTM 180
  181 RERYAANNLT NGLQFTLPLS SRKTYEPEAD DDSNDDMYSD DDSNADRWAS RIDTAALKEE 240
  241 VLKYMNRCST QDLADMTGCT LAEAEFMVAK RPFPDLESAL VVKQPRPVIP KGRRGRREKT 300
  301 PLGPRLVGIC MEIMRGYFVV DALIRQCEQL GGKIQRGIEA WGLSNTATSD EGETSLVNFD 360
  361 QMKSFGTPAN SSFITTPPAS FSPDIKLQDY QIIGINWLYL LYELKLAGIL ADEMGLGKTC 420
  421 QTIAFFSLLM DKNINGPHLV IAPASTMENW LREFAKFCPK LKIELYYGSQ VEREEIRERI 480
  481 NSNKDSYNVM LTTYRLAATS KADRLFLRNQ KFNVCVYDEG HYLKNRASER YRHLMSIPAD 540
  541 FRVLLTGTPL QNNLKELISL LAFILPHVFD YGLKSLDVIF TMKKSPESDF ERALLSEQRV 600
  601 SRAKMMMAPF VLRRKKSQVL DALPKKTRII EFCEFSEEER RRYDDFASKQ SVNSLLDENV 660
  661 MKTNLDTNAN LAKKKSTAGF VLVQLRKLAD HPMLFRIHYK DDILRQMAKA IMNEPQYKKA 720
  721 NELYIFEDMQ YMSDIELHNL CCKFPSINSF QLKDEPWMDA TKVRKLKKLL TNAVENGDRV 780
  781 VLFSQFTQVL DILQLVMKSL NLKFLRFDGS TQVDFRQDLI DQFYADESIN VFLLSTKAGG 840
  841 FGINLACANM VILYDVSFNP FDDLQAEDRA HRVGQKKEVT VYKFVVKDTI EEHIQRLANA 900
  901 KIALDATLSG NAETVEAEDD DD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] deduced N/A No confident structure predictions are available.
    2 View Details [177..347] FFAS03 1.68 Architecture of the photosynthetic oxygen evolving center
    3 View Details [348..922] PSI-BLAST 77.09691 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • DNA-dependent ATPase activity
    		•  2.72462789867829 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.69246499202248 bayes_pls_golite062009
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.61582393123755 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.59641929642359 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.59333672868803 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.2817164193758 bayes_pls_golite062009
  • transporter activity
    		•  2.17383908004663 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.11222585187695 bayes_pls_golite062009
  • ATPase activity
    		•  2.11122403732968 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.02444700826552 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.8908019270286 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  1.88455339138556 bayes_pls_golite062009
  • DNA binding
    		•  1.7904783386531 bayes_pls_golite062009
  • helicase activity
    		•  1.70242731830224 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.68903321260301 bayes_pls_golite062009
  • microtubule motor activity
    		•  1.6537049553461 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  1.62578154021163 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  1.61568379110546 bayes_pls_golite062009
  • GTP binding
    		•  1.60042477805119 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.47858140861683 bayes_pls_golite062009
  • hydrolase activity
    		•  1.35268825531078 bayes_pls_golite062009
  • motor activity
    		•  1.34881124154297 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
    		•  1.29640539057136 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.2539059700735 bayes_pls_golite062009
  • protein binding
    		•  1.22129154759482 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  1.19311444180077 bayes_pls_golite062009
  • DNA clamp loader activity
    		•  1.12431517057397 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  1.117585097627 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  1.05990253628867 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  1.05990253628867 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.97700154207756 bayes_pls_golite062009
  • GTPase activity
    		•  0.897989893461858 bayes_pls_golite062009
  • structural molecule activity
    		•  0.86514677273731 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.725611289205392 bayes_pls_golite062009
  • nucleotide binding
    		•  0.717697610309727 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.713814218071151 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.713752628021599 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.608058786636536 bayes_pls_golite062009
  • transcription factor activity
    		•  0.603758349693077 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.568457189190858 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.539479261019683 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.500462538667228 bayes_pls_golite062009
  • translation regulator activity
    		•  0.493216082928152 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.480200274620277 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.34746349346164 bayes_pls_golite062009
  • mismatched DNA binding
    		•  0.31144582840038 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.30832907234141 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.29532978396745 bayes_pls_golite062009
  • four-way junction helicase activity
    		•  0.26252931460003 bayes_pls_golite062009
  • ATP binding
    		•  0.19169045543599 bayes_pls_golite062009
  • exodeoxyribonuclease V activity
    		•  0.185603938981231 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.165732470448462 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.162060759063149 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.114463153989353 bayes_pls_golite062009
  • microfilament motor activity
    		•  0.10236059675512 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.081265446432119 bayes_pls_golite062009
  • 3'-5' DNA helicase activity
    		•  0.0769112340058804 bayes_pls_golite062009
  • protein transporter activity
    		•  0.0397092337273124 bayes_pls_golite062009
  • actin binding
    		•  0.00482938540552702 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle