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Protein Overview: ago1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..834] PSI-BLAST 55.39794 Crystal structure of A. aeolicus Argonaute

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • miRNA binding
  • 8.69268950569308 bayes_pls_golite062009
  • RNA cap binding
  • 6.0791415062122 bayes_pls_golite062009
  • translation initiation factor activity
  • 5.50078893654345 bayes_pls_golite062009
  • RNA 7-methylguanosine cap binding
  • 5.43471478554516 bayes_pls_golite062009
  • ribonuclease activity
  • 5.30591758406946 bayes_pls_golite062009
  • siRNA binding
  • 4.26412929341885 bayes_pls_golite062009
  • ribonuclease III activity
  • 4.20335726467076 bayes_pls_golite062009
  • 4.10363762148891 bayes_pls_golite062009
  • exoribonuclease activity
  • 3.71639182685131 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 3.59362615133405 bayes_pls_golite062009
  • exonuclease activity
  • 3.13676176369406 bayes_pls_golite062009
  • nuclease activity
  • 3.11657409772275 bayes_pls_golite062009
  • RNA binding
  • 3.01997241125209 bayes_pls_golite062009
  • transposase activity
  • 2.97988408226992 bayes_pls_golite062009
  • ribonuclease H activity
  • 2.91966688044755 bayes_pls_golite062009
  • hydrolase activity
  • 2.78602644579272 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 2.70794511869438 bayes_pls_golite062009
  • endonuclease activity
  • 2.63074055051349 bayes_pls_golite062009
  • endoribonuclease activity
  • 2.59247838057313 bayes_pls_golite062009
  • transcription regulator activity
  • 2.20855917457806 bayes_pls_golite062009
  • nucleic acid binding
  • 2.14285769817394 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 2.12039058720352 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 1.94077739152313 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 1.87431870698721 bayes_pls_golite062009
  • DNA binding
  • 1.86594005896134 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
  • 1.74431545836806 bayes_pls_golite062009
  • DNA polymerase activity
  • 1.64519652804477 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 1.59628511603826 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 1.54576601235316 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 1.44123900197846 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.363399194272 bayes_pls_golite062009
  • binding
  • 1.35497934205068 bayes_pls_golite062009
  • catalytic activity
  • 1.25233849524628 bayes_pls_golite062009
  • translation regulator activity
  • 1.24691427875148 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 1.22763794139559 bayes_pls_golite062009
  • transcription activator activity
  • 1.1830013572628 bayes_pls_golite062009
  • transcription factor activity
  • 1.17659544650821 bayes_pls_golite062009
  • mRNA binding
  • 1.10473275263716 bayes_pls_golite062009
  • protein binding
  • 1.08578027658199 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
  • 0.782108781904855 bayes_pls_golite062009
  • exodeoxyribonuclease activity
  • 0.77421125364834 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.599626528449085 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.58055486321736 bayes_pls_golite062009
  • kinase activity
  • 0.557302038379807 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 0.48776342704945 bayes_pls_golite062009
  • protein kinase activity
  • 0.354993329967566 bayes_pls_golite062009
  • DNA helicase activity
  • 0.283883977748512 bayes_pls_golite062009
  • double-stranded RNA-specific ribonuclease activity
  • 0.222737597484808 bayes_pls_golite062009
  • transferase activity
  • 0.0868471791986259 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.0701825322473915 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle