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Protein Overview: DNApol-alpha180-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..344] PSI-BLAST 8.154902 Heavy meromyosin subfragment
2 View Details [345..1253] PSI-BLAST 153.0 Exonuclease domain of family B (archaeal and phage) DNA polymerases; T4-like DNA polymerase
3 View Details [1254..1488] Pfam 25.346787 No description for PF08996.1 was found. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • DNA-directed DNA polymerase activity
  • 11.2781960093187 bayes_pls_golite062009
  • DNA polymerase activity
  • 11.2285838712952 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 8.85826259809475 bayes_pls_golite062009
  • DNA primase activity
  • 8.57378684936335 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 4.79232184185512 bayes_pls_golite062009
  • transferase activity
  • 4.02382113115178 bayes_pls_golite062009
  • RNA polymerase activity
  • 2.29514625858236 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 2.29514625858236 bayes_pls_golite062009
  • ribonuclease activity
  • 2.10426652514018 bayes_pls_golite062009
  • exonuclease activity
  • 1.68989335095363 bayes_pls_golite062009
  • nucleic acid binding
  • 1.62213678119562 bayes_pls_golite062009
  • DNA binding
  • 1.55767764828811 bayes_pls_golite062009
  • binding
  • 1.23825244840872 bayes_pls_golite062009
  • damaged DNA binding
  • 1.08077297289305 bayes_pls_golite062009
  • catalytic activity
  • 1.04899053677564 bayes_pls_golite062009
  • endonuclease activity
  • 0.991569665925888 bayes_pls_golite062009
  • transcription regulator activity
  • 0.863544378011356 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.85780161294346 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 0.78558451404229 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.78013028675591 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 0.48776342704945 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.433956339585542 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 0.43313823287883 bayes_pls_golite062009
  • chromatin binding
  • 0.382725239240319 bayes_pls_golite062009
  • protein binding
  • 0.377121823388117 bayes_pls_golite062009
  • nuclease activity
  • 0.332024848299731 bayes_pls_golite062009
  • DNA helicase activity
  • 0.283883977748512 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.262305398570872 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.206750180223289 bayes_pls_golite062009
  • single-stranded DNA specific exodeoxyribonuclease activity
  • 0.19596408995795 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
  • 0.193854882336037 bayes_pls_golite062009
  • 5'-3' exonuclease activity
  • 0.154583332107704 bayes_pls_golite062009
  • transcription factor activity
  • 0.093362945686819 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0873722112846369 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0504884604991491 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.0416785534748089 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.039082818442797 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle