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Protein Overview: Gnf1-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..125] MSA 1.163993 View MSA. No confident structure predictions are available.
2 View Details [126..224] PSI-BLAST 14.0 Crystal structure of N-terminal domain of E.Coli Lon Protease
3 View Details [225..402] PSI-BLAST 22.045757 Crystal Structure Analysis of ClpB
4 View Details [403..907] PSI-BLAST 54.69897 Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)
5 View Details [908..986] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 1.16354923842292 bayes_pls_golite062009
  • nucleic acid binding
  • 1.15712369152434 bayes_pls_golite062009
  • transcription regulator activity
  • 1.01821010146225 bayes_pls_golite062009
  • DNA binding
  • 0.851165739361333 bayes_pls_golite062009
  • transcription factor activity
  • 0.219534193320134 bayes_pls_golite062009
  • catalytic activity
  • 0.147263815852997 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • DNA clamp loader activity
  • 5.5471162885167 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 5.51408792884858 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 2.72462789867829 bayes_pls_golite062009
  • DNA helicase activity
  • 2.2817164193758 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • binding
  • 2.05253348982328 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.88455339138556 bayes_pls_golite062009
  • nucleic acid binding
  • 1.49633029954726 bayes_pls_golite062009
  • helicase activity
  • 1.16085745407703 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 0.971476020912368 bayes_pls_golite062009
  • DNA binding
  • 0.967303417236485 bayes_pls_golite062009
  • DNA polymerase activity
  • 0.928091843881235 bayes_pls_golite062009
  • transcription regulator activity
  • 0.748437190903548 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.249173645231486 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.089234257580272 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.0781650226500197 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle