| Protein: | Gnf1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 986 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MQRGIDSFFK RLPAKAKSAE AENGETPSKA PKRRKAVIIS SDEDEVVSPP ETKKRKASKT 60
61 ASSEDDVVAA TPEPIAKKAR NGQKPALSKL KRHVDPTELF GGETKRVIVP KPKTKAVLEF 120
121 ENEDI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [126-224] |
1 11 21 31 41 51
| | | | | |
1 DRSLMEVDLD ESIKEAAPEK KVHSITRSSP SPKRAKNSSP EPPKPKSTKS KATTPRVKKE 60
61 KPAADLESSV LTDEERHERK RASAVLYQKY KNRSSCLNP
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 2aneA |
| Description: | Crystal structure of N-terminal domain of E.Coli Lon Protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.16354923842292 | bayes_pls_golite062009 |
| nucleic acid binding | 1.15712369152434 | bayes_pls_golite062009 |
| transcription regulator activity | 1.01821010146225 | bayes_pls_golite062009 |
| DNA binding | 0.851165739361333 | bayes_pls_golite062009 |
| transcription factor activity | 0.219534193320134 | bayes_pls_golite062009 |
| catalytic activity | 0.147263815852997 | bayes_pls_golite062009 |
|
Region A: Residues: [225-402] |
1 11 21 31 41 51
| | | | | |
1 GSKEIPKGSP DCLSGLTFVV TGVLESMERE EAESVIKEYG GKVMTVVGKK LKYLVVGEEA 60
61 GPKKLAVAEE LNIPILSEDG LFDLIREKSG IAKQVKEEKK SPKKEHSSEE KGKKEVKTSR 120
121 RSSDKKEKEA TKLKYGEKHD IAKHKVKEEH TSPKETKDKL NDVPAVTLKV KKEPSSQK
|
| Detection Method: | |
| Confidence: | 22.045757 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [403-907] |
1 11 21 31 41 51
| | | | | |
1 EHPPSPRTAD LKTLDVVGMA WVDKHKPTSI KEIVGQAGAA SNVTKLMNWL SKWYVNHDGN 60
61 KKPQRPNPWA KNDDGSFYKA ALLSGPPGIG KTTTATLVVK ELGFDAVEFN ASDTRSKRLL 120
121 KDEVSTLLSN KSLSGYFTGQ GQAVSRKHVL IMDEVDGMAG NEDRGGMQEL IALIKDSSIP 180
181 IICMCNDRNH PKIRSLVNYC YDLRFQRPRL EQIKGKIMSI CFKEKVKISP AKVEEIIAAT 240
241 NNDIRQSINH IALLSAKEDA SQKSGQQVAT KDLKLGPWEV VRKVFTADEH KHMSFADKSD 300
301 LFFHDYSLAP LFVQQNYLQV LPQGNKKDVL AKVAATADAL SLGDLVEKRI RANSAWSLLP 360
361 TQAFFSSVLP GEHMCGHFTG QINFPGWLGK NSKSGKRARL AQELHDHTRV CTSGSRLSVR 420
421 LDYAPFLLDN IVRPLAKDGQ EGVPAALDVM KDYHLLREDL DSLVELTSWP GKKSPLDAVD 480
481 GRVKAALTRS YNKEVMAYSY SAQAG
|
| Detection Method: | |
| Confidence: | 54.69897 |
| Match: | 1sxjA |
| Description: | Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 5.5471162885167 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 5.51408792884858 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| binding | 2.05253348982328 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| nucleic acid binding | 1.49633029954726 | bayes_pls_golite062009 |
| helicase activity | 1.16085745407703 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA binding | 0.967303417236485 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| transcription regulator activity | 0.748437190903548 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.59513742813869 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.249173645231486 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0781650226500197 | bayes_pls_golite062009 |
|
Region A: Residues: [908-986] |
1 11 21 31 41 51
| | | | | |
1 IKKKKSEAAG ADDDYLDEGP GEEDGAGGHL SSEEDEDKDN LELDSLIKAK KRTTTSKASG 60
61 GSKKATSSTA SKSKAKAKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
