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Protein Overview: YPL199C

General Information:
Name(s) found: YPL199C [SGD]
Description(s) found:
Found 23 descriptions.
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  • Putative protein of unknown function, predicted to be palmitoylated [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGTGGVVVG TQNPVRDYNH STDEEYQRLR RLADEAYKKR DQLSHESQTA YQQGDKKLAH  60
   61 ELSEKSKAQL KTAEDFNMQA AEYVFVENNA DSSSNEIDLH GLYVKEALFI LQKRIKFAID 120
  121 HNEPQLNVIV GKGLHSQNGI AKLKPSIEEF CAKHGIRNHL EKGNSGVLVL ELQGVQMQMD 180
  181 GPAVNAPTNQ YNAQPHPQYN NNGGQPQGQA QNYNNSGNDN KDSTLTSIFK IFCNCIQSLA 240
  241

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) APD1 OXP1 SPC98 YPL199C
    View Details Qiu et al. (2008) AST2 ATG27 HMS2 MNL1 NAT3 REH1 RIA1 RPL11B RPL12B, RPL12A RPL13A RPL13B RPL14A RPL16A RPL17A RPL17B RPL19B, RPL19A RPL1A, RPL1B RPL20A RPL20B RPL21A RPL21B RPL22A RPL24A RPL24B RPL27B RPL29 RPL2A, RPL2B RPL31B RPL33B RPL34A RPL35A, RPL35B RPL36B RPL37A RPL38 RPL39 RPL40B, RPL40A RPL41A, RPL41B RPL42B, RPL42A RPL5 RPL6A RPL6B RPL8A RPL9A RPL9B RPP2A RPS0A RPS0B RPS10B RPS11A, RPS11B RPS16B, RPS16A RPS17A RPS18B, RPS18A RPS19B RPS1A RPS2 RPS21B RPS23B, RPS23A RPS24A, RPS24B RPS26A RPS27B RPS29A RPS29B RPS30B, RPS30A RPS4B, RPS4A RPS6A, RPS6B RPS7B RPS8B, RPS8A RPS9B TOS4 TSR1 VMA6 YGR117C YPL199C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SOG2 YPL199C 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YPL199C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [93..240] Pfam 27.769551 Smr domain No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.780949548591104 bayes_pls_golite062009
  • protein binding
    		•  0.245678926103876 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle