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Protein Overview: RRB1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #33 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #35 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #04 Alpha Factor Prep2 Keck JM, et al. (2011)
View Run MLP2 #06 Alpha Factor Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #19b Asynchronous Prep1-new search criteria Keck JM, et al. (2011)
View Run MLP2 #19a Asynchronous Prep1-new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen RRB1 BDS1 2 Unpublished Fields Lab Data
View Screen RRB1 YGR160W 2 Unpublished Fields Lab Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

  PROTEIN(S) PUBLICATION
View Data RRB1 Huh WK, et al. (2003)
View Data RRB1 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..181] MSA 1.673995 View MSA. No confident structure predictions are available.
2 View Details [182..511] PSI-BLAST 87.70927 beta1-subunit of the signal-transducing G protein heterotrimer

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • histone methyltransferase activity (H3-K4 specific)
  • 4.71992275913384 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.79445416141967 bayes_pls_golite062009
  • snoRNA binding
  • 2.62514080753887 bayes_pls_golite062009
  • binding
  • 2.42570478946173 bayes_pls_golite062009
  • transcription regulator activity
  • 2.3610959773142 bayes_pls_golite062009
  • nucleic acid binding
  • 2.30918780727915 bayes_pls_golite062009
  • transcription repressor activity
  • 2.29049708962212 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 2.18628561734369 bayes_pls_golite062009
  • histone methyltransferase activity
  • 1.85632145559025 bayes_pls_golite062009
  • DNA binding
  • 1.71685536470455 bayes_pls_golite062009
  • dynein binding
  • 1.62099593211487 bayes_pls_golite062009
  • transcription corepressor activity
  • 1.41752877005447 bayes_pls_golite062009
  • protein methyltransferase activity
  • 1.35170368882651 bayes_pls_golite062009
  • acetyltransferase activity
  • 1.23134876981279 bayes_pls_golite062009
  • protein binding
  • 1.21879977456466 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.19593750149343 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 1.15313682561559 bayes_pls_golite062009
  • transcription factor activity
  • 1.08768505897883 bayes_pls_golite062009
  • transcription initiation factor activity
  • 1.01962930136588 bayes_pls_golite062009
  • 0.88172763425403 bayes_pls_golite062009
  • histone binding
  • 0.685319917508843 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.676924760416604 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 0.625780732991652 bayes_pls_golite062009
  • actin binding
  • 0.529861581509437 bayes_pls_golite062009
  • transcription factor binding
  • 0.489473003915035 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 0.437810477160064 bayes_pls_golite062009
  • DNA polymerase activity
  • 0.428715007921149 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.426429095658617 bayes_pls_golite062009
  • kinase activity
  • 0.387572734234845 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.30761651528651 bayes_pls_golite062009
  • transporter activity
  • 0.284701931503833 bayes_pls_golite062009
  • structural molecule activity
  • 0.254012051644049 bayes_pls_golite062009
  • protein kinase activity
  • 0.229242350006544 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.226335610368636 bayes_pls_golite062009
  • DNA helicase activity
  • 0.220747580531792 bayes_pls_golite062009
  • enzyme regulator activity
  • 0.161639372576406 bayes_pls_golite062009
  • chromatin binding
  • 0.151977098745772 bayes_pls_golite062009
  • N-methyltransferase activity
  • 0.00335766408304172 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle